Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05114 TTGAGGCCTTTAGTTGAGCTGGAAATTCAAGCCTCACATTTTCATGGTTCTTATTCAGATGGTGTTACATTTCTTTATTTCCTAATAAAAGCTTCATTTAGTAATGGCATGAATCCTCATGTCTTTGTTACTTATTGCCAATCTGTTGGTGGTATAGTCATATTTCCTTTTGCTTATGTTCTTGAAAGAGAAGCAAGGCCAAAGTTGACGATGACAATGTTCTTGGAGTTGTTTATTCTTTCCCTCACAGGGATCAGTCTTGCCCCAAATCTGTATTTTCCAAGTTTTAAGTATACATCTCCTTCCTTTGTTGCATCCATGGTTAACATAATTTCATCTCTAATATTTGTGATTGCAGTTGTACTAAGGCCAGAGGCTATTGACATTAAGAACCCTCGTGGGGTAGCTAAAATTATTGGAAGCGTACTATCAATGATTGGTTCCTTGACCATGGCTTTTGTATAA 465 0.3677 LRPLVELEIQASHFHGSYSDGVTFLYFLIKASFSNGMNPHVFVTYCQSVGGIVIFPFAYVLEREARPKLTMTMFLELFILSLTGISLAPNLYFPSFKYTSPSFVASMVNIISSLIFVIAVVLRPEAIDIKNPRGVAKIIGSVLSMIGSLTMAFV. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05114 154 Pfam EamA-like transporter family 28 145 IPR000620 GO:0016020
Seca10g05114 154 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 145 - -
Seca10g05114 154 PANTHER WAT1-RELATED PROTEIN 24 153 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05114 Seca-Chr10 117079524 117080545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05114 28 151 Nodulin-like Gene Family AT5G07050 39.516 2.75e-27 103