Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05096 ATGTTATTCTCCACCACTTCTAAAAGCAATTTGACAGTGGCAGATTTAGGTTGCTCCTCAGGCCCTAATGCACTACTGGTCATATACAATATCATGACCATTATTAATAACACTAAATTGAGCTTAAATCATGAGGCTCCTACACTCCAAATTTATCTCAATGATCTATTTGGAAACGATTTCAATAGTATCATCAAGTTACTTCCTGAATTCTACCAAAGTATACGACAAGAAAGGGGAGACAAAGTTGGTGCATGCTTTATAAATGCAACACCAGGGAACTTTTATGGGAGACTCTTTCCTAATAATTACATCGACTTCTTTCATTCTTCCTATAGTCTCCATTGGCTCTCACAGGCTCCAGAAGAGTTGACCAAGGGTGAAAAACCACTAAACAAGGGCAACATATATTTAACAAGCACAAGCCCTCCAATGGTTTATAAAGCATACTTTGAGGAACTAACACCTGAAGGAAATATGGTACTAACTTTCATTGGAAGAGAAAGACCTCATCCAATTAGTGATCCTTGTGTGGTAATAATTGGAATGGTACTTAAAGACATGGTCTTAGAGGGTTTGGTTGAAGAGGCAAAATTGGACTCCTTTAATATGCCTATATATGAGCCGACAATAGAGGAAGTTAGACAACTCATTGAAGTAGAAAGATCCTTTATCCTTCAAACATTGAAAACTATCCAAATGGGTTGCGATGCAGGTATTCAGGATGATGTTGATAATTATGTCCTTAATAGCAAAATGAGAGGAGAGTTCATATCTAAGACCATTAGAGCTGTTTTTGAACCTCTTTTATCCGTTGAATTTGGCAAAGATATGATGGATGAATTTCAAGGTTTTCAAAGAATGCTTCACAACTCATGGAGTTGGAGACATTGGAGTACACAAATGTAG 909 0.3707 MLFSTTSKSNLTVADLGCSSGPNALLVIYNIMTIINNTKLSLNHEAPTLQIYLNDLFGNDFNSIIKLLPEFYQSIRQERGDKVGACFINATPGNFYGRLFPNNYIDFFHSSYSLHWLSQAPEELTKGEKPLNKGNIYLTSTSPPMVYKAYFEELTPEGNMVLTFIGRERPHPISDPCVVIIGMVLKDMVLEGLVEEAKLDSFNMPIYEPTIEEVRQLIEVERSFILQTLKTIQMGCDAGIQDDVDNYVLNSKMRGEFISKTIRAVFEPLLSVEFGKDMMDEFQGFQRMLHNSWSWRHWSTQM. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05096 302 Gene3D - 119 286 IPR042086 -
Seca10g05096 302 Gene3D Vaccinia Virus protein VP39 7 235 IPR029063 -
Seca10g05096 302 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 291 IPR005299 GO:0008168
Seca10g05096 302 Pfam SAM dependent carboxyl methyltransferase 4 286 IPR005299 GO:0008168
Seca10g05096 302 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 284 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05096 Seca-Chr10 116692516 116693952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05096 - - gmx:100783664 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05096 10 116692516 116693952 Seca10g02187 10 25055395 25056999 PCT