Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05078 ATGGTTAGTGCAATAAAGGCAGCAATTGGAGATGCAGTGTTGACTTTCATGTGGGTCTTCGTCTCTTCCACGCTTGGATTGGTCACCAGCGCCATAACCAAAGCTCTTGATCTTCATCTTGTGTCATACAATGGTCTTGATTACCCTTCTATTATAATCACCACTTTGCTCATCTTTGTCCTTGTCTTCATCTTCACAATCATTGGCAATGCTTTGGGTGGTGCCAGCTTCAACCCCACCGGCAATGCTTCCTTCTATGCAGCTGGTCTTGGCTCAGACACCCTTTTCTCTATGGCTCTCCGTTTCCCCGCTCAGGCTCTAGGTGCAGTTGGTGGTGCTTTGGCAATTATGGAGGTGATGCCACCAAAATACAGGCACATGATTATAGGACCTTCTTTGAAGGTTGACTTGCATACTGGAGCTGTTGCAGAAGGGGTGTTGACATTTGTAATCACTTTTGCTGTCCTATTCATCATGATCAGGGGTCCCCGTAGTGAAATGGTGAAAACTTGGATGATGGCAATGTCAACCGTGCCTTTGATTATTGCCGGTTCTACTTACACAGGACCATCCATGAATCCTGCCTTGGCTTTTGGTTTTGCATACTTAGATAACTGGCACAACACATGGGACCAATTCTATGTTTACTGGATTTGCCCCTTCATTGGAGCAATAGTGGCTGCTTGGGTGTTTCGAATTGTCTTTCCCCCACCAGTGGTAAAACAGAAGAAAGCGAAGCAGTTGAAGCCTCCTTCCTCCTCCGCCGTCTCCGCCTCCGGCACCGACCAGATCCGCTACCGGTCGCCGTCTTCCTCCGAACTCCTCGAAGATCACACCACAACCGCCGAGCTGGAACTCGAATCAACCAAAATGTTAAAGCGCTCCGGCCGCCAATCGCCGGCGGCGGCAGCACCGGAGTCGTTCTCCGAGAGGATCTACCAGTTCCGTGGTGCCTTTCTGATGGTGGCGCTCCCTCTCCTCCTCGTCACGCTCATTCTCTACCTCATGCCTTCCACCTCTTCCAACGAGTCCATCGAGGATTACGCCCTCACGCACCGCAAGATGTCCCCCGATCGCAAAAGCTCCGATTCCTTCGCCGTCATCTTCGACGCCGGTAGCTCCGGCAGCCGCGTCCACGTCTTCCGTTTCGACTACAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAGCTTTTCGTGCAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACGACAGGCCGCGGAATCTCTGATTACTCTTTTGGATAAAGCGGAAAGTGTTGTTCCCAGGGAGTTTCGCCCCATGACACCCGTTAGAGTTGGGGCAACGGCGGGTTTGAGGGCATTGGAAGGGGATGCCTCTGATAGGATCTTGCAAGCGGTCCGGGATTTGCTTAAGGAAAGAAGCACCCTGAAATATGAGCCTGACGCGGTTACTGTGCTGGATGGAACCCAAGAAGGTGCTTTTCAGTGGGTGACTATTAACTATCTACTGGGAAACTTAGGAAAAGATTATTCAGAGACTGTTGGTGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAAACAGGTGCTGCCAAGGCTCCAAAAGTACCAGATAGAGAGGATCCATATGTCAAGGAGATGTTCCTAAGAGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTGCTAGCAGCTCGTGCAGAGATTTTAAAGGTTTCTGATGATTCTGGAAACCCTTGCATCTTAGCTGGCTTTAATGGATCTTATAATTATGGAGGAAAATCATTTAAGGCCTCATCCTCCCCAGCTGGCTCAAGTTTGAATGATTGCAAAAGCATAGCTCAGAAGGCTCTCAAGGTTAACGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGCGGCGGGGATGGACAGAAAAACCTCTTCGTTGCCTCATTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAATTTACCCGTTGTGAAAGTTCGTCCTGTGGATTTTGAGGATGCAGCTAAGAAAGCTTGTCAAACAAAACTCGAGGATGCCAAATCCACCTACCAACGTGTTGAGGAGGGGAACCTTCCATATTTATGCATGGATCTTGTATACCAATATACATTGCTCGTTGTTGGATTCGGCCTAGATCCATGGCAACATATTACATTAGTGAAGAAAGTTAAATATCATGATGCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGCGCCATAGAAGCGGTATCATCTGCATAA 2301 0.4837 MVSAIKAAIGDAVLTFMWVFVSSTLGLVTSAITKALDLHLVSYNGLDYPSIIITTLLIFVLVFIFTIIGNALGGASFNPTGNASFYAAGLGSDTLFSMALRFPAQALGAVGGALAIMEVMPPKYRHMIIGPSLKVDLHTGAVAEGVLTFVITFAVLFIMIRGPRSEMVKTWMMAMSTVPLIIAGSTYTGPSMNPALAFGFAYLDNWHNTWDQFYVYWICPFIGAIVAAWVFRIVFPPPVVKQKKAKQLKPPSSSAVSASGTDQIRYRSPSSSELLEDHTTTAELELESTKMLKRSGRQSPAAAAPESFSERIYQFRGAFLMVALPLLLVTLILYLMPSTSSNESIEDYALTHRKMSPDRKSSDSFAVIFDAGSSGSRVHVFRFDYNLDLVHIGKDLELFVQIKPGLSAYAQNPRQAAESLITLLDKAESVVPREFRPMTPVRVGATAGLRALEGDASDRILQAVRDLLKERSTLKYEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETGAAKAPKVPDREDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKVSDDSGNPCILAGFNGSYNYGGKSFKASSSPAGSSLNDCKSIAQKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVVKVRPVDFEDAAKKACQTKLEDAKSTYQRVEEGNLPYLCMDLVYQYTLLVVGFGLDPWQHITLVKKVKYHDALVEAAWPLGSAIEAVSSA. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05078 766 Gene3D - 365 760 - -
Seca10g05078 766 FunFam Aquaporin SIP1-1 2 247 - -
Seca10g05078 766 Gene3D Exopolyphosphatase. Domain 2 485 744 - -
Seca10g05078 766 Gene3D Glycerol uptake facilitator protein. 1 247 IPR023271 -
Seca10g05078 766 MobiDBLite consensus disorder prediction 250 277 - -
Seca10g05078 766 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 CDD NBD_sugar-kinase_HSP70_actin 367 526 - -
Seca10g05078 766 FunFam Apyrase 1 485 744 - -
Seca10g05078 766 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 309 765 IPR000407 GO:0016787
Seca10g05078 766 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 484 499 IPR000407 GO:0016787
Seca10g05078 766 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca10g05078 766 Pfam GDA1/CD39 (nucleoside phosphatase) family 360 764 IPR000407 GO:0016787
Seca10g05078 766 MobiDBLite consensus disorder prediction 250 278 - -
Seca10g05078 766 SUPERFAMILY Aquaporin-like 3 239 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05078 Seca-Chr10 116449043 116464497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05078 306 765 Calmodulin-binding Proteins AT3G04080 68.261 0.0 620