Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05043 ATGGTTCTTCGAAATGATATTGATTTGCTAAATCCCCCAGCTGAGTTGGAGAAGAGAAAGCACAAACTCAAGCGTCTTGTTCAGTCACCAAACTCTTTCTTCATGGTATTATATGTCCTTCTTTTGTATATTACTATTCTTTGA 144 0.3611 MVLRNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMVLYVLLLYITIL. 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05043 47 Gene3D - 5 45 IPR023407 -
Seca10g05043 47 PANTHER 40S RIBOSOMAL PROTEIN S27 1 35 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05043 Seca-Chr10 115925832 115928095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05043 1 35 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 97.143 9.55e-21 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05043 K02978 - thj:104816698 66.2402