Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05018 ATGATTATCCAGCCCATTGTGGGCTATTGTAGTGACCGTTGTACCTTTCGCTTCAGTTGTCGTCGCCCTTTTCTCTTCTTTGGGTCCATTCTTGTCATCATCGCTGAACTACTCATTGACCTTGCTACTAGTAACCATAGTGAAATTGTCATCGCCAATAGCCTCTTCTCCTTCTTCATGGCTATAGGCAACATCTTGGGATATGCCGCAAGCTCCATCAATGGCCTCCACAACATTTTCCCGTTCAGACGAAGGCCGGCCTGTGATGTTTTCTGTGCAAATATGAAGACCTGCTTCTTCTTCTCAACCATTCTTCTACTAGTCCTCACCAGCTTTATACTATTTTATGTACAAGATATTCCGGTAGAAGATATTTCGGTAACATTGAGTGATGATGAGGAGTCGGGCTTTGAGTTGCTAAGCGTGTTATAG 432 0.4398 MIIQPIVGYCSDRCTFRFSCRRPFLFFGSILVIIAELLIDLATSNHSEIVIANSLFSFFMAIGNILGYAASSINGLHNIFPFRRRPACDVFCANMKTCFFFSTILLLVLTSFILFYVQDIPVEDISVTLSDDEESGFELLSVL. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05018 143 SUPERFAMILY MFS general substrate transporter 1 128 IPR036259 -
Seca10g05018 143 PANTHER SUGAR TRANSPORTER 37 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05018 Seca-Chr10 115481910 115485972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05018 1 137 Sucrose Transporter Gene Family AT1G66570 37.566 2.20e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05018 K15378 - gmx:100784153 133.65