Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05005 ATGGAGAAGAACCTTTCTGAGAATTCTGGAAGTTTCACTCGCAAAGACGAGGACACCATTACCGGAGACACCCCTAGTTTGCCATTATCGGAGCCTGTAAACAATGTTGATGCCAAACCAGATGGTGAAACTGAAACCGAAAAAGATGGAGAGCCGGATGATGAGGAGAAGAAGAAGGAGGAAGCAGCTGTAGAGGTTCCACCAGAAACTCCTCCTCCCAACCTGGAAAAGGTTTCAGAAGACATCGATCGTTTCCTTGTGACTTCACAACTCAATCATGACAACTCAGATTTCAAGGAAGTCTTGTTAGAGATCCCAGATTTCATCAACAGGTTCTTGGATCTCGTTGAAGAGAAGATCATGAGGTACGACACAGGGGAAGCCAAGTGGGGTGATGTTGCAGAGGAAGATTCCTCATTGTTGGAAGCCGTGAATCGAATTTCAAAGCTGGTGATGAATTTCATGAGCACAGAGTCACAATCACCCCAAGAAGAAGAAAAGGAAAAAGAAAAAGAAAAACAAGAGATGAATGAGAAAAGGGACTTGTTTGTGAATCGCATTGGTGGTATTCAACATCGTGCAATGTCGTATTTGGAGGAAGAGTTCCGAATATTGATGGAAGAATCTAGAAATCACAACAAATCAGAACCTGACGCAAAAGGGAAGCACGTGGCTACCGAATCGTTGGATTCTGAACTGGCAGAGATGGTAACAGATTTCCCGGGTTTTACGGAGGATGCCGTTACAAATCTGAACAAGATAGCGCGGGAGATGATATCTAGCGGTTTTGAATCAGAGTGTTGCCATGTTTACGCGGTTTCAAGGAGGCATGCATTTGAGGACAGCTTATTACACAAGTTAGGCTATGAGAAGATCAGCATCGACGAGGTTCAGAAAATGCAATGGGAGTCCTTAGAGAGAGAGATCCCAACGTGGATCAACACCTTCAAGGAATGCACTTCTATGTGGTTCCCTGGCGAGAAGAAGTTAGCAGAGTCAGTCTTCTTAGAGCACCCGTTGGTTGCAGCGAGTCTCTATGGTAGCCTCATTCGCATTGTTGCGATACAACTCCTTAACTTCGCAGAGAGTGTGTCAATGACGAAACGCGCTGGGGAGAAGCTCTTCAAGCTATTGGACATGTACGAGACCTTGAGGGACGCTATCCCGAATATGGAGAATATGTTCCCTGAGGAGTACGTTAGTGAAATCAAAGCCGAAACAACTTCAGCAAAGTGTAGACTCGGCGAGGCTGCAGTGCTTATATTTTGCGAGCTTGAGAACTCGATCAAATCTGAGACTGGGAAAACGCCAGTCGCTGGTGGAGCGGTTCACCCATTAACACGCTACATCATGAACTACCTAAGGTTGGCATGTGAATACAAGGACACGTTGGAGGAGGTGTTTAGGGAGCACTCAAAGATTGAGCGTGCGGACTCCACTAGTAGACCTCATTACGAAGGGGAGAGCCAAAATGATCACCACCAACAAAGGTCGATAGAAAAGGAAAACGCATCACCATTTGCAGCGCAATTGATGAGGGTGATGGGATTGCTTGACTCAAACCTTGAAGGGAAGGCAAAGCTGTATAGAGACACAGCATTGAGCTGCATCTTCATGATGAACAATGGGAGGTACATTGTTCAAAAAATCAAAGGCTCAACGGAGATTTATGAGGTTATGGGTGAGACATGGTGTAGGAAGAGATCCACTGAGTTGAGAACCTACCACAAGAATTACCAAGTAGAAACATGGAGCAAGATACTTAGTTGTCTTAGCCCTAAAGGGTTGAGTGATCATGGGAAGGTGCATAAACCGGTGCTGAAAGAGAGGTTTAAGAGCTTCAATGCTTTGTTTGAGGAGATACACAAGACGCAAAGCACATGGGTGGTGAGTGATGAACAACTTCAATCAGAGCTAAGAGTTTCTATTTCGGCGTTGGTGATACCTGCGTATAGGTCATTCTTGGGGAGGTTTTCACAATATTTGGATCCAGGGAGACAAACAGAGAAGTACATTAAGTTCCAAGCAGAGGATGTGGAGACTTACATCAATGAGTTGTTTGATGGGAACCCTCACCATCCGGGAAATGCTAGAAAGAAAGCATGA 2106 0.4516 MEKNLSENSGSFTRKDEDTITGDTPSLPLSEPVNNVDAKPDGETETEKDGEPDDEEKKKEEAAVEVPPETPPPNLEKVSEDIDRFLVTSQLNHDNSDFKEVLLEIPDFINRFLDLVEEKIMRYDTGEAKWGDVAEEDSSLLEAVNRISKLVMNFMSTESQSPQEEEKEKEKEKQEMNEKRDLFVNRIGGIQHRAMSYLEEEFRILMEESRNHNKSEPDAKGKHVATESLDSELAEMVTDFPGFTEDAVTNLNKIAREMISSGFESECCHVYAVSRRHAFEDSLLHKLGYEKISIDEVQKMQWESLEREIPTWINTFKECTSMWFPGEKKLAESVFLEHPLVAASLYGSLIRIVAIQLLNFAESVSMTKRAGEKLFKLLDMYETLRDAIPNMENMFPEEYVSEIKAETTSAKCRLGEAAVLIFCELENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFREHSKIERADSTSRPHYEGESQNDHHQQRSIEKENASPFAAQLMRVMGLLDSNLEGKAKLYRDTALSCIFMMNNGRYIVQKIKGSTEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSCLSPKGLSDHGKVHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDVETYINELFDGNPHHPGNARKKA. 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05005 701 MobiDBLite consensus disorder prediction 161 178 - -
Seca10g05005 701 SUPERFAMILY Cullin repeat-like 135 688 IPR016159 -
Seca10g05005 701 MobiDBLite consensus disorder prediction 475 501 - -
Seca10g05005 701 MobiDBLite consensus disorder prediction 38 65 - -
Seca10g05005 701 MobiDBLite consensus disorder prediction 475 500 - -
Seca10g05005 701 MobiDBLite consensus disorder prediction 155 178 - -
Seca10g05005 701 Pfam Exo70 exocyst complex subunit 312 685 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca10g05005 701 PANTHER EXOCYST COMPLEX PROTEIN EXO70 113 689 IPR004140 GO:0000145|GO:0006887
Seca10g05005 701 MobiDBLite consensus disorder prediction 1 77 - -
Seca10g05005 701 Gene3D Exocyst complex component Exo70 127 695 - -
Seca10g05005 701 FunFam Exocyst subunit Exo70 family protein 125 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05005 Seca-Chr10 115303068 115305197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05005 35 690 EXO70 exocyst subunit family AT5G13990 50.659 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05005 K07195 - gmx:100819960 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03278 2 100418396 100420528 Seca10g05005 10 115303068 115305197 PCT