Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g05001 | ATGGCTACCAACACACTGATGAGCTCTGCTATCACAGCCTTCCCTTCTCTTCTTTCTTCCTCAAAATCCAAATTTGCCTCTGCAGTTCCACTTTCCTGCTTTGGTTCCAATGCCTCTTCTCGCTTCACCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGCTCTGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGATTCAAGGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTAAAAGCTCAGGAATGGGCAGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGAAACCCTGTTCCATGGGGCACCCTCCCAACCATTCTTGTCATTGAATTCCTTTCTATTGCATTTGTGGAGCACCAGAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCATGAATACAAAGTTAAAGAAATTAAGAATGGACGTCTTGCTCTTTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCTTATCCTGGCACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGGAATATCATTATTCCCCAATAG | 723 | 0.4786 | MATNTLMSSAITAFPSLLSSSKSKFASAVPLSCFGSNASSRFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQ. | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g05001 | 240 | Gene3D | Chlorophyll a/b binding protein domain | 49 | 235 | - | - | |
Seca10g05001 | 240 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 49 | 235 | - | - | |
Seca10g05001 | 240 | Pfam | Chlorophyll A-B binding protein | 55 | 209 | IPR022796 | - | |
Seca10g05001 | 240 | SUPERFAMILY | Chlorophyll a-b binding protein | 38 | 237 | - | - | |
Seca10g05001 | 240 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 44 | 235 | IPR001344 | GO:0009765|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g05001 | Seca-Chr10 | 115279225 | 115281641 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g05001 | 1 | 196 | Chloroplast and Mitochondria Gene Families | AT3G54890 | 82.828 | 6.29e-108 | 308 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g05001 | K08907 | - | gmx:100305992 | 459.914 |