Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04994 ATGCCGCCGGAACCAATACCGTGGGATCGAAAGGACTTGTTCAAGGAGAGGAAGCACGAGAGGTCTGAGTCTTTAGGGCCCGTGGCCAGATGGAGAGACTCCTCCGGCTCCCGAGAGTACAATCGCTGGGGATCGCCAGATTTTCGCCGAGCCCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTCCAGAAGAATCTGGTCATGGTTATGGACTTTCTCGAGGGGAAGCAGACAACTGTCGGCCATCACTTTCTCGAGGGGATGGAAGGTATGGCAGGAGCAATAGGGAAAGTAGAGGGTCCTTTAGCCAGAGAGATTGGAGAGGTCCTTCGTGGGAAACCACTAACGGCCCTCTGAATTTGTCCCGGAGGCAACCGGGCATGAATAATAACTGGAGGTCAGTTGATGATATGGTAACATATTCCTCTCATCCACATTCTGAGTTTGCAAACACTTGGGAGCAGCATCACTTGAAAGACCAGCGTGATAAGATGAGTGGTGTCAATGGATTGAGTACAGGCCACAGACGTGACAGGGACAGTTCTCTGGATTCGATTGACTGGAGGCAACTTAAATGGACCCGTTCTGGAAGCTTGACTTCACGAGGGTCAGGCTTTTGCCACTCAAGTAGCTTGAGGAGCACAGGGGCGAGAGATTCCTGTGAAGGGAAGGCTGGGTTGCAACACAAAAATGCAACCGCTGCTGAGTCAAATTCAGGGGAAGCTGCTGCATGTGGGACATCTGCTCCATCTGAAGAAACAAATTCGAGGAAGAAGCCCAGGCTAAATTGGGGTGAGGGACTTGCGAAGTTTGAGAAAAAGAAAGTTGAGGGGCCTGATGTAATTGCAAACAAAGATGATCCTGTCTTGTCTCCTATTAATATGGAACCTAGTAATTTCCTTGGTCCCAGCGTAGTAGATAAAAGCCCAAAAGTTTCAGGATTTTCAGAATGTGCATCCCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTGTTTGGAAAAGCTGCAAATGTGGACAATGATGTTAATAATTTAAGTGGTTCACCTGGTCCCGGGTCTCAAAATCATCTGCAGATGGTTTCTTTCAATTTAGAGAAGGTGGGTATTGACTCATTGACTAGTTTGGGCTCTTTACTTGCTGAATTGCTAGAGTCTGATGATCCAAGCTCTGTGGATTCTAATCTATTAAGATCTGCTACAATGAATAAGTTGCTGATATTGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAAACTGAAATTGATTTATTAGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGATAGGTTTCCATGTTCTGCAGCAGTTGGTTCCCTGCTGGCATGTTACAATGCAAAATCTTGTGATGAACATGTTGGAGGCTTTGACAAGGTTGCTCATCCAGAACCATTGCAAATGGTTTCTTCTGATGACCCTAATGTGGAGAAGGTGGCTTTTCCTACTGATTTGCATGATATTCATGATAATGGCAAGGAAGATGATATTGACACTCGTGGAACTACAATGTCTAATTTTGTGGAGCCCCTGCCCTTGATTAATGCAGTTTCTTCATGTGATGTGGATAGATACGGTACTTGCTCTGAAGACTTGGATGGAATTCAGTCTAAAGCAGTAAAATGCTTAGTTCCCTGTACTTATAGGCAAGTTGCCAGTGTATCTGTTTGTGATGGTAAATCATCTATGGAGGTTAAAGATGGCATGTATGCTAAATCCGGGGCAAGCTTTTATTCCAGCCCTGAGGATATTTTATATGATACAATTATCTCTTGCAATAAAGAAACTGCAAAAATAGCATGTGAAGCATTTTCTAAGTTATTGCCAGAAGAATGTGGTAAGATCAGTAATATTGGAGCTATCAGTGGCTCATGCTCTCACGAGGGGGCATTCATCATAGAAAAATTTGCAGAGACAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTCTAACACTCAAGTTTAAAGCCTTGCATCACATGTGGAAAGAAGATTTGCGCTTACTGTCTATTAAGAAATGCCGCCCAAAATCTCACAGGAAACTTGAATTAGGTCTACGAACTGTCAGTAATGGTCATCAGAAGAACCGTTCTTCTATTCGTTTTCCCTCCCCTGCAGCGGGAAATCAACTTAGCTTGGCTCCAACATCTGAGATTATTAATTATACAAGCCAACTACTTTCAGATTCTCAAGCTAGAATTCACAGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAAATGTTTTCAAAGTTTTTATCTAGTAATGGGCTGATTGATGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAACCCTTGGACATCAGAAGAGAGAGAGATCTTCTTGGAGAAATTTGCAGCCTTTGGAAAAGATTTTCGGAAAATTGCATCTTTCCTTGACCACAAGACAACGGCTGACTGTATTGAGTTCTACTACAAAAATCATAAGTCTGATTGTTTTGAGAAAATTAAGAAAAAAGATGGTGGTAAACTACGGAAGTTGTTTACAACCAAAACTGACTTGATGGCATCAGGTAAAAAATGGAATCGTGATATGAATGCTTCTTCACTTGAGATTTTAAGTGCAGCTTCAGTGATGGCAGGTGGCATTACAGGTAACCGAAAAATGCGCTCAGGAAGTTCCATTTGGAGTGGATATGGTGATTTAAAAACATCAAGGGGTGAGGATAGCATCGCAGAGAGATTAAGTGGTTTTGATGTTCTTCAAGATGAAAGAGAGACTGTAGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTCCCATCTGAGGTTATGAGTTCATGCATAAACAGTTCAGTTGATCCTGTGGAAGGTAACAGGGATAGGAAAGTGAGATCTCTATGCAAACAATCTGTGGTGCCTGATGTTACTCAGAATATTGACGATGGAACTTGTTCTGATGAGAGCTGTGGTGAAATGGGTCCTACTGATTGGACAGATGGGGAGAAGGCAGCCTTTATTCAGGCTGTATCATCTTTTGGAAAGGATTTCATTATGATTGCACGGTGTGTTGGAACAAGGTCCCGAGATCAGTGCAAAGTGTTTTTCAGCAAGGCTCGTAAATGCCTTGGATTGGATCTTGTGCACCCCAGACCTGAAAATATTGGATCACTAGTGAATGATGATGGAAATGGTGGCAGGAGCGACCCAGATGATGCATGCGTTCTAGAGAAAGGTTCAGTTATTGAGTCTGATATGTCAGGTGCTAAAACAGATGAGGACCTGCCTCCATCTGTCATGAACACATACCATGATGAATCCAGAGCCATGGAGGCTAGGGACCTGTCAGCTGACTTAAATGAATCAAAAAAAATGGGAGGTGCAGTTACAGAATTGGTGTCTGCTTCAGACATAATTGAACCATGCTACACTAATCCTGTTGCTGATAGACTGGTTTCTGAGGTTTCTTCTGGGTGTCGTGGAAATGAATTTGAGGGTTCAGATATCTGTCTCGTTGACAGAGATGATATACATGAAGCTGATACAGATGTTGTAGTTGAATTGAAACACCAAGCCTACCATTCAAGCACTCTAGTTAATACTTCAGTGTCATCTGTAGGCATTTCTTGTTCAAGATTGAGTTTTGGTGCTGAAAACCAGCCCCAATTCTGTCTTGATGGAAAGCCTCATTTATCAGGACCATCGGAGGATCCTCCTCCGACTGCAAATCCAATGTTGCAAAATACTGCTGGTGCTACTGTACAACATGAAAAAACAGCTAGCCAAAATCCACTGTCTTCTACTTGTGATTTTCATGGAAGTAAAGATTTCAGTGGTCATAGTTCCAGTAGTAATGGTGGCTGTCAGCTTCATAATCCTGGGAATCTATTAGACAATGTTGAGGCTGCTAGAATCCTTCAGTGCAATCCTTTGCAAGTGCCTGTTAAGGAGGTGAATGCAGATATAAGGTGCAGCAGTTCAGAGTTGCCTTTTTTGTCCCAAAAGATTGAACAAGCTGATGATAATGGCAAAACACAGTTGCTGTGTTTGTCAGATTCAGAAAAAACATCAAGAAATGGTGATTTGAAACTGTTTGGGAAGATCCTAACCAATCCTTCATCCACCCAGAATCCTACTTTAACTGCCCAGGGAAACGAAGAAAATGGTACCCATCATCCGAAGTTAAGCAGCACCTCTTCTAGTCTAAAATTTACTGGCTGTCACAATGCTAACAGAAAATCTACTATTTTGAAGTTTGATCATAATGATAACCAGGGCCTTGAAAATGTTCCCATCATGAGTTATTGGGATGGGAGCAGAAAACAGCCTGGTTTATTATCATCACTACCTGATTCTGCCATTGTGCTTGCAAAATATCCTGATGCATTTAGTAATTATCCTACATCTTCCAAATTAGAGCAACGGTCATTGCAGATGTTGGCCAAGAATGAACAACACCTGAATGGAGTATCTGCTTTTACAACTACAGAAGACAACGGAAGCAATGGTGTCATTGATTATCAGGTGTTTAGAAATAGGGATGGTCTGAAAGTGCAGCCATTTCTGGTAGATGTAAAGGATCACCAAGATGTGTTCTCTGAGACGCAGAGAATAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGGGTAGGGGAATGGTGGGACTGAATGGTGTTGGGAGATCAGGGATTCTTGTGGGAGGATCAGGCGCTGGAGTCTCAGATCCTGTGGCTGCCATCAAAATGCATTTTTCCAATGCTGACCAATATGGCAGTCAGACTGGGAGTATCATGAGAGGATGA 4833 0.4277 MPPEPIPWDRKDLFKERKHERSESLGPVARWRDSSGSREYNRWGSPDFRRAPGHGKQGGWHLFPEESGHGYGLSRGEADNCRPSLSRGDGRYGRSNRESRGSFSQRDWRGPSWETTNGPLNLSRRQPGMNNNWRSVDDMVTYSSHPHSEFANTWEQHHLKDQRDKMSGVNGLSTGHRRDRDSSLDSIDWRQLKWTRSGSLTSRGSGFCHSSSLRSTGARDSCEGKAGLQHKNATAAESNSGEAAACGTSAPSEETNSRKKPRLNWGEGLAKFEKKKVEGPDVIANKDDPVLSPINMEPSNFLGPSVVDKSPKVSGFSECASPATPSSVACSSSPGVDDKLFGKAANVDNDVNNLSGSPGPGSQNHLQMVSFNLEKVGIDSLTSLGSLLAELLESDDPSSVDSNLLRSATMNKLLILKADISKVLEVTETEIDLLENELKSLKSESGDRFPCSAAVGSLLACYNAKSCDEHVGGFDKVAHPEPLQMVSSDDPNVEKVAFPTDLHDIHDNGKEDDIDTRGTTMSNFVEPLPLINAVSSCDVDRYGTCSEDLDGIQSKAVKCLVPCTYRQVASVSVCDGKSSMEVKDGMYAKSGASFYSSPEDILYDTIISCNKETAKIACEAFSKLLPEECGKISNIGAISGSCSHEGAFIIEKFAETKRFARFKERVLTLKFKALHHMWKEDLRLLSIKKCRPKSHRKLELGLRTVSNGHQKNRSSIRFPSPAAGNQLSLAPTSEIINYTSQLLSDSQARIHRSTLKMPALILDEKEKMFSKFLSSNGLIDDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFRKIASFLDHKTTADCIEFYYKNHKSDCFEKIKKKDGGKLRKLFTTKTDLMASGKKWNRDMNASSLEILSAASVMAGGITGNRKMRSGSSIWSGYGDLKTSRGEDSIAERLSGFDVLQDERETVAADVLAGICGSLPSEVMSSCINSSVDPVEGNRDRKVRSLCKQSVVPDVTQNIDDGTCSDESCGEMGPTDWTDGEKAAFIQAVSSFGKDFIMIARCVGTRSRDQCKVFFSKARKCLGLDLVHPRPENIGSLVNDDGNGGRSDPDDACVLEKGSVIESDMSGAKTDEDLPPSVMNTYHDESRAMEARDLSADLNESKKMGGAVTELVSASDIIEPCYTNPVADRLVSEVSSGCRGNEFEGSDICLVDRDDIHEADTDVVVELKHQAYHSSTLVNTSVSSVGISCSRLSFGAENQPQFCLDGKPHLSGPSEDPPPTANPMLQNTAGATVQHEKTASQNPLSSTCDFHGSKDFSGHSSSSNGGCQLHNPGNLLDNVEAARILQCNPLQVPVKEVNADIRCSSSELPFLSQKIEQADDNGKTQLLCLSDSEKTSRNGDLKLFGKILTNPSSTQNPTLTAQGNEENGTHHPKLSSTSSSLKFTGCHNANRKSTILKFDHNDNQGLENVPIMSYWDGSRKQPGLLSSLPDSAIVLAKYPDAFSNYPTSSKLEQRSLQMLAKNEQHLNGVSAFTTTEDNGSNGVIDYQVFRNRDGLKVQPFLVDVKDHQDVFSETQRINGFEAISSLQQQGRGMVGLNGVGRSGILVGGSGAGVSDPVAAIKMHFSNADQYGSQTGSIMRG. 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04994 1610 MobiDBLite consensus disorder prediction 105 131 - -
Seca10g04994 1610 ProSiteProfiles SANT domain profile. 1002 1053 IPR017884 -
Seca10g04994 1610 CDD SANT 1007 1045 IPR001005 -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 199 265 - -
Seca10g04994 1610 SUPERFAMILY Homeodomain-like 1005 1053 IPR009057 -
Seca10g04994 1610 Coils Coil 417 444 - -
Seca10g04994 1610 ProSiteProfiles SANT domain profile. 790 841 IPR017884 -
Seca10g04994 1610 SMART sant 1003 1051 IPR001005 -
Seca10g04994 1610 SMART sant 791 839 IPR001005 -
Seca10g04994 1610 SUPERFAMILY Homeodomain-like 778 838 IPR009057 -
Seca10g04994 1610 Gene3D - 965 1062 - -
Seca10g04994 1610 Gene3D - 771 843 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 1377 1410 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 1234 1256 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 163 182 - -
Seca10g04994 1610 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1210 1599 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 199 218 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 8 27 - -
Seca10g04994 1610 Pfam Myb-like DNA-binding domain 794 835 IPR001005 -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 232 254 - -
Seca10g04994 1610 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04994 Seca-Chr10 115116133 115125169 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca10g04994 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04994 - - lang:109337705 1847.4