Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04986 ATGGTTTGTAAGTTTATTGACATTTTACGTATTGCATATGCATTTCGGGAGAGTGGAAGACCAATATCAGGAGATGTAGGTGTTATACCTCCAAATGCTTCACTCCAAATATATCTCGAGTTAGTCTCATGGAACACCATATCTGACATTACCAAGGATAGGAAGCTTTTTAAAGCCTTCTTTCGCTTTCTTTGGTTTCCATGTTTTATATATTGGATAGGAGTATTGAGGAGATGCATTATTTGTATTCTTTTAGTGAAACTTATTGGCAAGCTGCAGAATGGGACCATTTTCCTTAAGAAAGGCTATGGTGATGAACAACCGTTTGAGTTCAAAACTGATGAAGCTATCTTAAATTGTTTTAACTTTAATTGGGTTACTCTTTTTTTCTCCTTATTTAATCTTTACTATAGTGTATCTTGGGCGTGCCATGTAGAGCGAGTAATAGATGGACTTGATAGAGCTGTGAAAAGCATGAAGAAAGGAGAAATTGCATTGGTGACCATACAACCTGAATATGCTTTTGGTACATCTGGGTCCTCTCAAGAATTGGCTACTGTCCCTCCCAATTCCAATGTGTACTATGAAGTTGAGTTGCTTTCCTTTGTAAAGGTTGAGATAAAACAATTACCAAGTCCAACCTATTGA 648 0.3673 MVCKFIDILRIAYAFRESGRPISGDVGVIPPNASLQIYLELVSWNTISDITKDRKLFKAFFRFLWFPCFIYWIGVLRRCIICILLVKLIGKLQNGTIFLKKGYGDEQPFEFKTDEAILNCFNFNWVTLFFSLFNLYYSVSWACHVERVIDGLDRAVKSMKKGEIALVTIQPEYAFGTSGSSQELATVPPNSNVYYEVELLSFVKVEIKQLPSPTY. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04986 215 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 86 200 IPR001179 GO:0003755
Seca10g04986 215 SUPERFAMILY FKBP-like 145 206 - -
Seca10g04986 215 Gene3D - 82 205 IPR046357 GO:0003755
Seca10g04986 215 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 86 206 - -
Seca10g04986 215 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 81 203 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04986 Seca-Chr10 114925918 114928057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04986 14 205 Calmodulin-binding Proteins AT3G25230 29.381 1.49e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04986 K09571 - ahf:112742476 199.519