Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04977 ATGGAAATTAACCTTACATCAAGAAAAATCATTAAACCATCGTTGCCAACTTCCAATGAATCCAAAACCCACAAACTATGTTTATTTGATGTGTTTCAACTCAACACCTATTTCCCATTAATCCTATTTTACCGCAAAATAAAAGACATGCATGGATTCTCAGACATTTCAACCCAATTGCAAAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGATTCCTTCTCCATCAATTGCAACGATGAGGGTGCAATTTACATTGAAGCCTCAGTGAATATCAACATGGACAAGTTCCTAAAACCACCCAAAATAGAATTGATAAACAAATTGCTTCCATGTGAGCCAAACAAAAAGCACCCTTACCAACAAGTCTTGCCACAACTTCAAGTCCAAGTGAACATTTTCAATTGTGGAGGGATAGCTATTGGGTTGTGCAATCTCCACACCATCCTTGATGCATTGTCTTGTAGTGCCTTCTTGAAAACTTGGTCTTCCATTTGCAATGGTTCAAGGGATGGAATTTCATGGCCAGATTTCTCCTCTGCTTCTTCTCTGTTCCCTCCAAGAAACACCTTTGGTGTACGTGCTGGTGTACTGAATATTGACAAAAGCTCAGAGATAGAAGTTCAGTGCACCACAAGAAGATTCTTGTTCATGACCAAATCAATCAATGAACTTCAAGCCATGTCTGAAAATGATGGAATCTACAAGAGTCCTACACGTTACAAGGCAGTGTCTTCATTCATCTGTAAACACATGATTGTAGCATGCACAGAGGAACCTTGTGACAGAACTAGGCCAGTAGTAGTGTTACATGTTGTGGACATGAGGAAAAGGATGGGAGAACCATTCTCACAAGATTCTATTGGGAACTTGTTGTGGCCTGCAGTGGTGCTTTGTGAGAATGTTAACAAGGACACTAAAGTTGGAGATTTGGTTAGACTTTTAGAGCAAGAAATTGGAAAGCTTACAAAGGAATTGTTTCTAAAAGTGCATAATGATCCTGGTTTTATGTGGAGTGATGAGTGTGCACAACTAATGCTTGAAGGAATAGCCAACAAAAACCCAATTTCGTTTGTGTTCACGAGCTGGGTTAATATGGGATTCAGAGAATTGGACTTTGGTTGGGGAAAGCCTTTATGGCTGGCTCAACGAGGAGGCACAAAGGAAAGTATTCCAAACACAGTAGTGTTGATGGAAACGGATGAGGGAATAGAGGCGTGGGTGACAATGGAAGAGAAACATATTACTACCTTGGAAAATGATGTAGAGTTCCTCAGATTAGCTTTGCTTAATCCTAGTGTTTCAAACATATAG 1338 0.3991 MEINLTSRKIIKPSLPTSNESKTHKLCLFDVFQLNTYFPLILFYRKIKDMHGFSDISTQLQKSLSEALTIFYPLGGRRSDSFSINCNDEGAIYIEASVNINMDKFLKPPKIELINKLLPCEPNKKHPYQQVLPQLQVQVNIFNCGGIAIGLCNLHTILDALSCSAFLKTWSSICNGSRDGISWPDFSSASSLFPPRNTFGVRAGVLNIDKSSEIEVQCTTRRFLFMTKSINELQAMSENDGIYKSPTRYKAVSSFICKHMIVACTEEPCDRTRPVVVLHVVDMRKRMGEPFSQDSIGNLLWPAVVLCENVNKDTKVGDLVRLLEQEIGKLTKELFLKVHNDPGFMWSDECAQLMLEGIANKNPISFVFTSWVNMGFRELDFGWGKPLWLAQRGGTKESIPNTVVLMETDEGIEAWVTMEEKHITTLENDVEFLRLALLNPSVSNI. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04977 445 PANTHER F21J9.9 6 434 - -
Seca10g04977 445 Pfam Transferase family 2 432 - -
Seca10g04977 445 Gene3D - 1 205 IPR023213 -
Seca10g04977 445 Gene3D - 216 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04977 Seca-Chr10 114674277 114675614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04977 1 427 Monolignol Biosynthesis Gene Families AT5G48930 22.616 2.70e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04977 - - gmx:102667966 693.345