Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04964 ATGAATCCAATCAAGCAAACAAAACAATCTGAAATGTTCACCACACTAACCATCCCTGCGATACTCCTTTTCATATTCATCCTATCATCCCTTCTTGTATTGCATCCAAAACGACGTCGTGGAGATGATGGGAAACCTGCAGCACCACCAGGTCCAAAGGCGTTACCAATTATTGGTAACCTCCTAATGCTAGGGAAACTCCCTCACCGCAACCTTCAATCCCTTGCCGCAAAATACGGACCCATAATGTCCTTAAAGTTAGGACAAGTCCCAGCCATTGTGGTATCTTCCACTGAAACAGCAGAGCTATTCCTTAAAACCCACGACACCGTGTTTGCCAGCAGGCCTAAACTTCAAGCCTCGGAGTGTCTCTCTCATGGAAGCAAGGGATTTGCGTTTTGTGAGTATGGTCCATACTGGCGAAACATGAGGAAAGTGTGTACTTTGCAGCTTCTTAGTGCATCCAAAGTTGAGATGTTTGCTCCCCTGAGGAGGGAGGAGTTGGGGCTGTTGGTGAAGTCACTTAAAAATGCAAGAGAGGTTGTGGATCTGAGTGAGTTGGTTGGGGAGCTAATAGAGGGAATTGTGTATAAAATGATATTGGGGCGAAGTAAGGATGAAAGGTTTGACATAAAGGAACTTATTCATGAGGTAATGAACTTGGTTGGAGCATTCAATGTTGCAGATTTTCTGCCTTGGCTTGGCGTCTTTGATACTCAGGGATTAACAAGACGACTAAAGAAAGCAAGTAAGGAGTTCGACCAAGTCGTGGAGCATATTATCAAAGACCATGAGCATTCATCTAATAAAGAACAAAAAGACTCACACAAAGACTTCGTAGATATATTGCTATCTCTTATGCACCAACCCATAGATCCTCATGATGAACAAAATGTCATTGATAGAACTAACATCAAGGCCATTATATTGGACATAATTGCCGGAGCATTTGACACATCTACTACTACGATTGATTGGGCTATGTCAGAACTCTTAAGGCATCCAAGGGTAATGAAAAAACTTCAAGAGGAGCTAGAAAATGTAGTGGGGATGAATAGAATGGTAGATGAGAGCGATTTAGAGAATTTGCCTTATCTTAATATGGTGGTGAAGGAGACACTACGTCTATATCCGGTTGCACCTTTGCTATTGCCTCGTGAGACTCGAGAAGATGTCATTATCAATGATTATTACATAAGGAAAAAATCAAGAGTCATAATAAATGCATGGGCAATAGGACGAGATCCTAAAGTTTGGTCAAATAATGCTGAGACTTTTTATCCAGAAAGATTTGCCAATGGTAATGTGGATATTCGTGGAAATGACTTTCGAATTATACCATTTGGTTCAGGACGTAGAGGTTGTCCTGGGATTCATCTGGGTCTAACAACTGTTAAGCTTGTTCTAGCTCAATTGGTGCATTGCTTCAATTGGGAGCTTCCATTGGACATGATTCCTGATGACTTGGACATGAATGAGAAATTCGGTCTAACAATGCAAAAAAGTAAGCACTTGCTAGTTATGCCAATTTATCGACTAGTTTGTGAAGTTAAAAGCGGGTAA 1563 0.4133 MNPIKQTKQSEMFTTLTIPAILLFIFILSSLLVLHPKRRRGDDGKPAAPPGPKALPIIGNLLMLGKLPHRNLQSLAAKYGPIMSLKLGQVPAIVVSSTETAELFLKTHDTVFASRPKLQASECLSHGSKGFAFCEYGPYWRNMRKVCTLQLLSASKVEMFAPLRREELGLLVKSLKNAREVVDLSELVGELIEGIVYKMILGRSKDERFDIKELIHEVMNLVGAFNVADFLPWLGVFDTQGLTRRLKKASKEFDQVVEHIIKDHEHSSNKEQKDSHKDFVDILLSLMHQPIDPHDEQNVIDRTNIKAIILDIIAGAFDTSTTTIDWAMSELLRHPRVMKKLQEELENVVGMNRMVDESDLENLPYLNMVVKETLRLYPVAPLLLPRETREDVIINDYYIRKKSRVIINAWAIGRDPKVWSNNAETFYPERFANGNVDIRGNDFRIIPFGSGRRGCPGIHLGLTTVKLVLAQLVHCFNWELPLDMIPDDLDMNEKFGLTMQKSKHLLVMPIYRLVCEVKSG. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04964 520 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 CDD CYP71-like 78 505 - -
Seca10g04964 520 SUPERFAMILY Cytochrome P450 49 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PANTHER CYTOCHROME P450 93A3-LIKE 38 513 - -
Seca10g04964 520 Pfam Cytochrome P450 49 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Seca10g04964 520 Gene3D Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04964 520 FunFam Cytochrome P450 83B1 37 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04964 Seca-Chr10 114311896 114315692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04964 37 514 Cytochrome P450 AT3G48310 40.373 7.23e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04964 - - aprc:113867069 767.689