Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04961 ATGTTGACTCAAACATTGGCCATCCCTTCAATGCTCCTTTTGATACTATTTTTCATTCTATTCACAGCCTTGTTTTTGCAACCAAAACAACATCAAGATGGTAGGAAACTTCCACCAGGTCCCAAGGCCCTTCCTATTATAGGTAACCTCCATATGCTTGGGAAACTCCCACATCGCTCCCTTCAAGCTCTTGCCACTAACTATGGACCCATCATGTCCTTGAAATTGGGACAGGTCCCAACCATTGTGGTTTCTTCCCCTGAAATAGCTGAGTTATTCCTCAAGACCCATGACATTGTTTTTGCTAGTAGGCCTATAACTCAAGCAACAAAATATCTTGGTTATGGTAGTAAGGGCTTAGTGTTTTCTGAGTATGGTTCCTATTGGCGCAACATGAGAAAGTTGTGCACCACACATCTTCTAACTGCATCAAAAGTTGAGATGTTTGCTCCTTTAAGGAGGGAGGAGTTAAGTGTATTTGTGAAGTCACTTGAAAAAGCAGCAACCTCACATGAGGTTGTAAATATCAGTGAGAAGGTTGGGGAACTTATAGAGAATATTGTCTACAAAATGATACTGGGGCGTAGTAAGGATGATAGGTTTGACTTAAAGGGGCTTATTCAGGAGACTCTACACTTGGTTGGAGCTTTTAATCTAGGAGATTTTATACCATGGGTTGGTGCCTTTGATCTTCAGGGACTAGTAAGACAATTCAAGAAAACAAGCAAGGCATTGGACCAAGTGTTAGAGCGGACCATCAAAGATCATGAGGTCTCTTATGAAAACAACAAGCATCTTAAGGATTTTGTGGACATATTGCTCTCAATAATGCACCAACCCATGGATGATCAATATGACGATCAGAAACATGTCATTGATAGAACTAATATAAAGTCTATTATATTGGATATTATTTCCGCAGCATATGACACGTCTGTTATTTCAATTGAGTGGACTATGTCAGAACTCTTGAGGCATCCAAGGGTTATGAAAAGACTTCAAGATGAGTTAAAGAATGTAGTAGGGATAAATAGGATGGTAGAGGAGGCTGACATAGAAAAGTTGCCTTACCTAAATATGGTGGTGAAAGAGACCTTAAGGTTATACCCAGTTGGTCCTTTATTGCCTCATGAGTCTAGAGAAGATGTTACTATCAATGGATATTACATACAAAAAAAGTCACGAATTTTAATCAATGCTTGGGCAATGGGGCGAGATCCTAAAGTTTGGTCAGAGAATGCTGAGGTGTTTTATCCAGAGAGATTTGTCAATAACAACATAGACATGCGAGGACATGATTTTCAACTTATTCCATTTGGTTCAGGGCGTAGAATGTGTCCTGGGATGCAATTGGGCCTAATTACTATTGGATTTGTTGTAGCTCAATTAGTGCATTGCTTTAATTGGGAGCTTCCATTAGGCATGTCTCCTGATGACTTAGATATGACTGAGGAATTTGGCCTTACTATCCCAAGAAGTAAGCATTTAGTAGCTGTGCCAACCTATCGCCTATACTAA 1518 0.3986 MLTQTLAIPSMLLLILFFILFTALFLQPKQHQDGRKLPPGPKALPIIGNLHMLGKLPHRSLQALATNYGPIMSLKLGQVPTIVVSSPEIAELFLKTHDIVFASRPITQATKYLGYGSKGLVFSEYGSYWRNMRKLCTTHLLTASKVEMFAPLRREELSVFVKSLEKAATSHEVVNISEKVGELIENIVYKMILGRSKDDRFDLKGLIQETLHLVGAFNLGDFIPWVGAFDLQGLVRQFKKTSKALDQVLERTIKDHEVSYENNKHLKDFVDILLSIMHQPMDDQYDDQKHVIDRTNIKSIILDIISAAYDTSVISIEWTMSELLRHPRVMKRLQDELKNVVGINRMVEEADIEKLPYLNMVVKETLRLYPVGPLLPHESREDVTINGYYIQKKSRILINAWAMGRDPKVWSENAEVFYPERFVNNNIDMRGHDFQLIPFGSGRRMCPGMQLGLITIGFVVAQLVHCFNWELPLGMSPDDLDMTEEFGLTIPRSKHLVAVPTYRLY. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04961 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 Gene3D Cytochrome P450 27 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 FunFam Cytochrome P450 83B1 24 499 - -
Seca10g04961 505 CDD CYP71-like 68 496 - -
Seca10g04961 505 PANTHER CYTOCHROME P450 93A3-LIKE 13 504 - -
Seca10g04961 505 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Seca10g04961 505 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04961 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04961 Seca-Chr10 114284541 114287288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04961 5 504 Cytochrome P450 AT5G07990 40.900 7.07e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04961 - - gmx:100781782 743.421