Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04960 ATGATGTTACCTCAAGCATTAGTTATACCTGCTGCAGTACTCCTTCTGATATTCATTTTTATTCTATCAGCTGCTCTATTTCATCCCAAACAACATCAAAATGATGGGAAACATCCACCAGGTCCCAAGGCCTTACCAATTATTGGTAACCTCCACATGCTAGGAAAACTCCCACATCGAACCCTTCAAGCCCTTGCCACAAAATATGGACCCATAATGTCCTTGAAGCTAGGACAGGTTCCAACCATTGTGGTTTCCTCCCCTGAAACTGCAGAGCTATTCCTCAAGACCCATGACACTGATTTCGCTAGCAGGCCCAAAATTCAAGCTTCTGAATACATGTTTTATGGTGGAAAGGGATTGGGACTAGCTCAGTATGGTTCTTACTGGCGTGACATGAGAAAAATTTGTACTTTGCAACTTCTGAGTGCATCAAAAGTTGAGATGTTTGCACCTTTGAGGAGGGAGGAGTTGGGGCAGTTGTTGAAGTCACTTGAGAAAGCTGCAGCTTCAAGTGAAGTTGTGGACCTGAGTGAGATGGTTGGGGAGCTTATAGCGAATATTACTTATAAAATGGTATTGGGATGCAATAAGGACAATAGTCTTGATTTAAAAGGGCTTATCCGTGAGGCAATGAATCTTTCAGGAGCTTTTAATTTGGCAGATTTTTTGCCTTGGCTACGCTTTTTTGATCCTCAGGGATTAGCAAGTCGAATGAAGAAAACAAGCAAGGCATTTGACCAAGTTGTAGATCAGATCATCAAGGATCATGAGCATCCTTCAGAAGACAAAAAGAAAGACCCTCACAAAAAGGACTTTATTGACATATTACTATCAATAATGCACCAATCCATGGATCCTCAAGGGGAACATACACAAGTCATTATAGATAGAACTAATATCAAAGCTATTATATTGGATATGATTGGTGGAGCACTAGACTCATCTACAACAACAATTGAATGGGCTATGTCAGAACTCTTGAGGCATCCAAATGTGATGAAGAAACTTCAAGATGAGCTACAAAATGTGGTGGGAATGAATAAAAAACTTGAAGAAAATGAGTTAGAAAGGTTACCTTATTTATATATGGTAGTGAAGGAGACCTTAAGATTATATCCAGCTGGACCTTTGTTAGCACCTCGTGAGTGTCTAAAAGATGTTACAATTGATGGTTATCACATAAAAAAGAAGTCAAGGATCATAATAAATGCATGGGCAATAGGGCGTGATCCTAAAGTTTGGTCAAATAATGCTGACATGTTCTATCCAGAGAGGTTTTTGAATAGCAATGTAGACCTTAGAGGACATGACTTTCAACTTATACCATTTGGTTCTGGTCGTAGAGGGTGTGCTGGAATTAATTTGGGCCTAAATACTGTTAGGCTTGTTGTGGGTCAATTAGTTCATTGTTTCAATTGGGAGCTTCCATTGGGTATGTCTCATGAGGATTTGGACATGACTGAGAGATTTGGCCTTTCAATGCCAAAACTTAACCACTTGCTAGCTGTGCCAATTCCTCGGGTAGTTGATAAATCAAATTGA 1545 0.3981 MMLPQALVIPAAVLLLIFIFILSAALFHPKQHQNDGKHPPGPKALPIIGNLHMLGKLPHRTLQALATKYGPIMSLKLGQVPTIVVSSPETAELFLKTHDTDFASRPKIQASEYMFYGGKGLGLAQYGSYWRDMRKICTLQLLSASKVEMFAPLRREELGQLLKSLEKAAASSEVVDLSEMVGELIANITYKMVLGCNKDNSLDLKGLIREAMNLSGAFNLADFLPWLRFFDPQGLASRMKKTSKAFDQVVDQIIKDHEHPSEDKKKDPHKKDFIDILLSIMHQSMDPQGEHTQVIIDRTNIKAIILDMIGGALDSSTTTIEWAMSELLRHPNVMKKLQDELQNVVGMNKKLEENELERLPYLYMVVKETLRLYPAGPLLAPRECLKDVTIDGYHIKKKSRIIINAWAIGRDPKVWSNNADMFYPERFLNSNVDLRGHDFQLIPFGSGRRGCAGINLGLNTVRLVVGQLVHCFNWELPLGMSHEDLDMTERFGLSMPKLNHLLAVPIPRVVDKSN. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04960 514 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 SUPERFAMILY Cytochrome P450 39 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PANTHER CYTOCHROME P450 93A3-LIKE 15 508 - -
Seca10g04960 514 Pfam Cytochrome P450 39 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 Coils Coil 334 357 - -
Seca10g04960 514 CDD CYP71-like 68 501 - -
Seca10g04960 514 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04960 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Seca10g04960 514 FunFam Cytochrome P450 83B1 26 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04960 Seca-Chr10 114255869 114259177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04960 12 510 Cytochrome P450 AT5G07990 39.489 6.25e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04960 - - gmx:100798918 700.279