Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04957 ATGAGGAAAGTGTGCACCTTGCAGCTTCTGAGTGCTTTGAAAGTTGAGTCCTTTGCTCCTTTGAGGAAACAAGAAGTGGAAGCAGCAGTTAAATTGATTCAGAAAGAGGCAAGGGTGGGTGAGGCTTTGGATCTCAGTGAAGTGGTGCAGGGGGTTTTGGAGGATATTGTGTATAAAATGGTGTTGGGGTGTAGCAAAGATGATAAGTTTTATTTGAAGGGGCTTATCCAAGATGCAATGCTTCTCGCTGGAAAGTTTAATGTCACAGATTATGTGCCTTGGCTTGGGATATTGGATATACAGGGTCTAAGACGAGGCTTCAAGAAAACAAGTAAAGCACTTGATGAAATGCTAGAGAAGATAATCAAGGAACATGAAGAGGCTTCCAATGCACAACATAAGGACTTCATAGATATACTACTCTCAATGATGCACCAACCAATTGATCCTTATGATGATCAAAATCATACCATTGATCGAACAAACATAAAGGCTATTGTCTTAGACATGATTGCTGCAGCATTTGATACTTCAGCTACTGTTATTTTGTGGGCTTTATCAGAGCTATTAAGGCATCCAAAAGTGATGAAAAACCTTCAAGATGAGCTAGGTACTGTGATAGGAATGAGCAAATTGGTGGAGGAGACTGATTTAGTAAAGTTGAATTACTTAGATATGGTGATTATGGAGACCTCAAGATTGCATCCTGCTGGATCACTTCTTACCTGTGTGGCAATTGAGGATACTATGATTAATGGTTATTACATAAAGAAAAATTCAAGAGTCATAGTAAATGTATGGGCAATAGGGAGAGATCCAAAGGTTTGGGGTGACAATGTTGATGTGTTTTATCCAGAGAGATTCATCAATAACAACATAGACATTAGAGGACATGACTTTAGGATGTTACCATTTGGTAGTGGTCGCAGAGGATGCCCTGGAATGAACATGGGTCTTGTTAATGTTAAACTTGTTTTATCTCAGTTAGTACATTGCTTTAATTGGGAACTTCCACATGGCATGACTCCTGAAGACTTGGACATGAGTGAGGAATATGGCATAACAGTGCCAAGAGCCACACACTTGCATGCTGTGCCATCATATCGCCTTCTTAGTACAACCTTGAATTAA 1131 0.397 MRKVCTLQLLSALKVESFAPLRKQEVEAAVKLIQKEARVGEALDLSEVVQGVLEDIVYKMVLGCSKDDKFYLKGLIQDAMLLAGKFNVTDYVPWLGILDIQGLRRGFKKTSKALDEMLEKIIKEHEEASNAQHKDFIDILLSMMHQPIDPYDDQNHTIDRTNIKAIVLDMIAAAFDTSATVILWALSELLRHPKVMKNLQDELGTVIGMSKLVEETDLVKLNYLDMVIMETSRLHPAGSLLTCVAIEDTMINGYYIKKNSRVIVNVWAIGRDPKVWGDNVDVFYPERFINNNIDIRGHDFRMLPFGSGRRGCPGMNMGLVNVKLVLSQLVHCFNWELPHGMTPEDLDMSEEYGITVPRATHLHAVPSYRLLSTTLN. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04957 376 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 305 314 IPR017972 GO:0005506|GO:0016705
Seca10g04957 376 FunFam Uncharacterized protein 32 365 - -
Seca10g04957 376 Gene3D Cytochrome P450 1 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 Pfam Cytochrome P450 1 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS E-class P450 group I signature 162 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS E-class P450 group I signature 312 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS E-class P450 group I signature 302 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS E-class P450 group I signature 182 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS P450 superfamily signature 226 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS P450 superfamily signature 303 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 PRINTS P450 superfamily signature 173 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04957 376 Coils Coil 111 134 - -
Seca10g04957 376 PANTHER CYTOCHROME P450 93A3-LIKE 1 370 - -
Seca10g04957 376 SUPERFAMILY Cytochrome P450 1 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04957 Seca-Chr10 114195980 114198436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04957 1 371 Monolignol Biosynthesis Gene Families AT4G36220 38.402 1.94e-91 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04957 - - aprc:113867069 537.724