Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04956 ATGTCCTGCAACATGTTTCCTTCAACTTTAGCAATCTCATGGATCATTTTGGCTTTCATATTCATCCTATCAGCTACCCTTTTGTGGAAACAGAGCCAACATGACCGGAAACAACCACCAGGTCCACCAGCTCTGCCAATTTTGGGCCACCTTCACTTATTGGGGAACCTTCCCCACCGCACACTTCAAACCTTGTCCAAAAAATATGGCCACATCATGTCCCTTCGATTGGGACAGGTCCCAACCATTGTGGTCACATCCCCTGAAGCTGCTGAGCAATTCTTAAAGACCCACGAATCTGTTTTTGCAAGCAGACCAAAAATTGAAGCCTCCAAGTACCTCTCTTATGACTACAAAGGCTTGGTGTTTTCTCAGTATGGTGCTTACTGGCGTAACATGAGGAAAGTGTGCACCTTGCAGCTTCTGAGTGCTTTGAAAGTTGAGTCCTTTGCTCCTTTGAGGAAACAAGAAGTGGAAGCAGCAGTTAAATTGATTCAGAAAGTGGCAATGGTGGGTGAGGTTGTGGACTTGAGTGAAGTGGTGCATGGGCTTGTGGAGGATATTGTGTATAAAATGGTGTTGGGGTGTAGCAAGGATGATAAGTTTGATTTGAAGGGGCTTATCCAAGATGCATTGCTTATCGCTGGAAAGTTTAATGTCACAGATTATGTGCCTTGGCTTGGGATATTGGATATACAGGGTCTAAGACGAGGCTTCAAGAAAACCAGTAAAGCACTTGACGAAGTGCTAGAGAGGATAATCAAGGAACATGAACATGCTTCCAATGCACAACATAAGGACTTCATAGACATATTACTCTCAATGATGCACCAACCAATTGATCCTTATAATGATCAAAATCATACCATTGATCGAACAAACATAAGGGCTATTGTCATAGACATGATTTCTGCGGCATTTGATACTTCTACTACTGTTATTTTGTGGGCTTTATCTGAGCTATTAAGGCATCCAAAAGTGATGAAAAACCTTCAAGATGAGCTAGGTACTGTTGTAGGAATGAGCAAATTGGTGGAGGAGACTGATTTAGTAAAGTTGAGTTATTTGGATGTGGTGATTAAGGAGACATTAAGATTGCATCCTACTGCTGCAACATTGATTACCCGAATGTCAATAGAGGATACTATGATTAATGGTTATTATATAAAGAAAAATTCAGGAATTTTCATAAATGTATGGGCAATAGGACAAGATCCGAAGGTTTGGTCTGATAATGCTGATGTGTTTTATCCAGAGAGATTCATCGATAATAACATAGACATTCGAGGATGTGACTTTAGAATGTTACCATTTGGCTCTGGTCGTAGAGGCTGTCCTGGGATGAACTTGGGTCTTGTTACTGTTAAGCTTATTCCGGCTCAATTAGTACATTGCTTTACTTGGAAGCTTCCACAGGGTATGGCTCCTGAAGACTTGGACATGAGTGAGGAATATGGTATAACAGTGCCAAGAGCCACGCACTTGTTTGCGGTGCCAACATGTCGTTTTCTTAGCACAACCTTGGATTAA 1530 0.4163 MSCNMFPSTLAISWIILAFIFILSATLLWKQSQHDRKQPPGPPALPILGHLHLLGNLPHRTLQTLSKKYGHIMSLRLGQVPTIVVTSPEAAEQFLKTHESVFASRPKIEASKYLSYDYKGLVFSQYGAYWRNMRKVCTLQLLSALKVESFAPLRKQEVEAAVKLIQKVAMVGEVVDLSEVVHGLVEDIVYKMVLGCSKDDKFDLKGLIQDALLIAGKFNVTDYVPWLGILDIQGLRRGFKKTSKALDEVLERIIKEHEHASNAQHKDFIDILLSMMHQPIDPYNDQNHTIDRTNIRAIVIDMISAAFDTSTTVILWALSELLRHPKVMKNLQDELGTVVGMSKLVEETDLVKLSYLDVVIKETLRLHPTAATLITRMSIEDTMINGYYIKKNSGIFINVWAIGQDPKVWSDNADVFYPERFIDNNIDIRGCDFRMLPFGSGRRGCPGMNLGLVTVKLIPAQLVHCFTWKLPQGMAPEDLDMSEEYGITVPRATHLFAVPTCRFLSTTLD. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04956 509 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 Gene3D Cytochrome P450 28 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 FunFam Cytochrome P450 83B1 26 498 - -
Seca10g04956 509 CDD CYP71-like 68 495 - -
Seca10g04956 509 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PANTHER CYTOCHROME P450 93A3-LIKE 14 502 - -
Seca10g04956 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Seca10g04956 509 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04956 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04956 Seca-Chr10 114188411 114190936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04956 19 503 Cytochrome P450 AT5G07990 38.294 1.32e-124 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04956 - - aprc:113867069 719.153