Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04955 ATGTTTCCTTCAACTATAGTAATCTCATGGATCATTTTGGCTTTCATATTCATCCTAGCAGCAACCCTGTTGCGGAAACAGAGCCAACATGACCGGAAACAACCACCAGGTCCACCAGCTCTGCCAATTTTGGGCCACCTTCACTTAATGGGGAAACTTCCCCACCGCACCCTTCAAACCTTGTCCAAAAGATATGGCCCCATCATGTCCCTGCGATTGGGACAGGTCCCAATCATTGTGGTCACATCCCCTGAAGCTGCTGAGCAATTCCTAAAGACCCAAGAATCTGTTTTTGCAAGCAGACCAAGAATTGAAGCCTCCAAGTACCTCTCTTATGACTACAAGGGCTTGCTGTTTTCTCAGTATGGTGCTTACTGGCGTAACATGAGGAAAGTGTGCACCTTGCACCTTCTAAGTGCTTTGAAAGTTGAGTCCTTCGCTCCTTTGAGGAAACAAGAAGTGGAAGCAGCAGTTAAATTGATTCAGAAAATGGCAATGGTAGGTGAGGTTGTGGACTTGAGTGAAATGGTGCATGGGCTTTTGGAGGATATTGTGTATAAAATGGTGTTGGGGTGTAGCAAGGATGATAAGTTTGATTTGAAGGGGCTTATCCAAGATGCATTGCTTATCGCTGGAAAGTTTAATGTCACAGATTATGTGCCTTGGCTTGGGGTATTGGATATACAGGGTCTAAGACGAGGCTTCAAGAAAACTAGTAAAGCACTTGATGAAGTGCTAGAGAAGATAATCAATGAACATGAACAAGCTTCCAATGCACAACATAAGGACTTCATAGACATATTACTCTCAATGATGCACCAACCAATCGATCCTTCTGATGATCAAAATCATACCATTGATCGAACAAACATAAAGGCTATTGTCTTAGACATGATTTCAGGGGCATTTGATACTTCTGCTACTGTTATTTTGTGGGCTTTATCAGAGCTATTAAGGCATCCAAAAGTGATGAAAAACCTTCAAGATGAGCTAGGTACTGTGGTAGGAATGGGCAAATTGGTGGAGGAGTCTGATTTAGTAAAGTTGAGTTATTTGGATGTGGTGATTAAGGAGACATTAAGATTGCATCCTGCTGGAACATTGATTACCCGAATGTCAATAGAGGATACTGTGATTAATGGTTATTACATAAAGAAAAAATCAGGAATCTTAATAAATTTATGGGCAATAGGACAAGATCCAAAGGTTTGGTCTGAAAATGCTGATGTGTTTTATCCAGAGAGATTCATCAATAATAACATAGACATTCGAGGATGTGACTTTAGGATGTTACCATTTGGTTCTGGTCGTAGAGGCTGTCCTGGGATGAACTTGGGTCTTGTTACTGTTAAGCTTATTTTGGCTCAATTAGTACATTGCTTTAATTGGGAGCTTCCACAGGGCATGACTCCTGATGACTTGGACATGAGTGAGGAATATGGATTAACAGTGCCAAGAGCCACACACTTGTTTGCTGTGCCAACATGTCGTCTTAGCACTACCCATAATTGA 1512 0.416 MFPSTIVISWIILAFIFILAATLLRKQSQHDRKQPPGPPALPILGHLHLMGKLPHRTLQTLSKRYGPIMSLRLGQVPIIVVTSPEAAEQFLKTQESVFASRPRIEASKYLSYDYKGLLFSQYGAYWRNMRKVCTLHLLSALKVESFAPLRKQEVEAAVKLIQKMAMVGEVVDLSEMVHGLLEDIVYKMVLGCSKDDKFDLKGLIQDALLIAGKFNVTDYVPWLGVLDIQGLRRGFKKTSKALDEVLEKIINEHEQASNAQHKDFIDILLSMMHQPIDPSDDQNHTIDRTNIKAIVLDMISGAFDTSATVILWALSELLRHPKVMKNLQDELGTVVGMGKLVEESDLVKLSYLDVVIKETLRLHPAGTLITRMSIEDTVINGYYIKKKSGILINLWAIGQDPKVWSENADVFYPERFINNNIDIRGCDFRMLPFGSGRRGCPGMNLGLVTVKLILAQLVHCFNWELPQGMTPDDLDMSEEYGLTVPRATHLFAVPTCRLSTTHN. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04955 503 CDD CYP71-like 64 490 - -
Seca10g04955 503 FunFam Cytochrome P450 83B1 22 493 - -
Seca10g04955 503 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 Gene3D Cytochrome P450 20 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 PANTHER CYTOCHROME P450 93A3-LIKE 9 498 - -
Seca10g04955 503 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04955 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04955 Seca-Chr10 114139119 114142131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04955 15 499 Cytochrome P450 AT5G07990 39.802 1.66e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04955 - - aprc:113867069 734.561