Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04933 ATGCAGACTGAGAAGACTAAAAAAGAAGAAAAAAAGGTAGATGATTCAAAACAGATTGAGAAGGCCATAAAGGAAGAAAAGAAGGCAGATAATTCAATACATAGTGAGAAGATTAAGAATGAGGAAAAGAAGATAGAGGACTCAATACAAAATGAGAAGACTAAAATGGAAGAGAAGAAGACAGATGACTTAATACAGACTGAGAAGACTAAAATGGAAGAGAAGAAAGATGTCTCAATACAGACTGAGAAAACTAAAGAGGAGGAAAAGATGGTAGATGATAAAGAAATTATTAGATTGAATAAAGAGCTGGATGACAAAAATATGGAAATTTCAACATTGAAGCAAGAACTAGAAAAAATGAGAAAAACATATGAAGTACAATGCTCACAGTTGGAAGCACATGCTGAGGATGCTAAAGGAGAACTGAAACAGAAATCACAAGAATATGAGAATCAGTTGGAAAGATTAAGAAATAAGGTTAAAGAGAATGAGGCCTTTACTGAGTCTAAATATCAGAAGTGGATCATGAAAGAGAAACAAATACAGAAAGCTGTCACTTTTCAGTTTAGTTCCATACAGAAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGGACAAATGGTTTATGCAGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAGTAGATGCAGCTGAGAATTATCAATCAGTTCTTTCAGAAAATCGAAAACTGTTTAATGAAGTTCAAGAATTAAAAGGAAACATCAGAGTATATTGTAGACTCAGACCATTTCTACCTGGACAGAAGGAAAAGCAGTCTATTGTGGAACACATTGGTGAAACTGATTTGGTTGTGGCAAATCCCTCCAAACAAGGGAAAGAAGCCCTTAAAACATTTAAGTTTAACAAGGTCTTTGATCCAGCCTCAACTCAAGCTGAGGTATATGCTGACATACAAGGCTTTATACGATCAGTACTTGATGGGTATAATGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATGGTGCAACAAGTGAGACTGTTGGTGTTAACTATAGAGCTCTGAATGACCTCTTCAACATATCCTCAAGTAGAAAAAGCTCCATAGTCTATGAAATTGGGGTTCAAATAATTGAGATATATAATGAACAAGTTCGAGATTTGTTATCAGCTGAAGCTTCTCCAAAAAAACTTGGGATATTGAATCACTCTCAACCAAATGGTTTAGCAGTACCTGATGCTAGCATGCAACCTGTGAAATCAACTGCAGATGTCATAAAACTAATGGACATTGGTCTTAAAAATAGAGCCAAGGGTGCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGGTGGATAAGAAATCTGGTTCTTCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGACTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCACTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAGTGCCCATATACCATACAGAAACAGCAAGCTTACTCAACTTTTGCAAACATCACTTGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCTGAATCTTTAAGTACTTTGAAGTTTGCTGAGAGGGTCTCTGGAGTTGAGTTAGGAGCTGCAAGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTGATGGAGCAGGTGGCTTCTCTGAAGGATACTATTTTGACAAAAGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGAACTGAAAAATGTTCAGCCCAATGTCAATTCTGAGAAGCTTGAAACTGCCACCGATTGA 1932 0.369 MQTEKTKKEEKKVDDSKQIEKAIKEEKKADNSIHSEKIKNEEKKIEDSIQNEKTKMEEKKTDDLIQTEKTKMEEKKDVSIQTEKTKEEEKMVDDKEIIRLNKELDDKNMEISTLKQELEKMRKTYEVQCSQLEAHAEDAKGELKQKSQEYENQLERLRNKVKENEAFTESKYQKWIMKEKQIQKAVTFQFSSIQKLKLSWESIKQDVMKGQMVYAEECNRLGVNLKSLVDAAENYQSVLSENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETDLVVANPSKQGKEALKTFKFNKVFDPASTQAEVYADIQGFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATSETVGVNYRALNDLFNISSSRKSSIVYEIGVQIIEIYNEQVRDLLSAEASPKKLGILNHSQPNGLAVPDASMQPVKSTADVIKLMDIGLKNRAKGATAMNERSSRSHSVVSIHVRGVDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLSQKSAHIPYRNSKLTQLLQTSLGGQAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKELKNVQPNVNSEKLETATD. 644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04933 643 PANTHER KINESIN-LIKE PROTEIN KLP-3 19 624 IPR027640 GO:0003777|GO:0007018
Seca10g04933 643 Coils Coil 596 616 - -
Seca10g04933 643 Gene3D Kinesin motor domain 198 584 IPR036961 -
Seca10g04933 643 Coils Coil 24 59 - -
Seca10g04933 643 PRINTS Kinesin heavy chain signature 329 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 PRINTS Kinesin heavy chain signature 483 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 PRINTS Kinesin heavy chain signature 452 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 PRINTS Kinesin heavy chain signature 532 553 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 197 584 - -
Seca10g04933 643 Coils Coil 235 255 - -
Seca10g04933 643 Coils Coil 97 167 - -
Seca10g04933 643 ProSiteProfiles Kinesin motor domain profile. 255 582 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 MobiDBLite consensus disorder prediction 1 90 - -
Seca10g04933 643 Pfam Kinesin motor domain 261 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 620 IPR027417 -
Seca10g04933 643 SMART kinesin_4 253 590 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g04933 643 Gene3D - 93 133 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca10g04933 Seca-Chr10 113635130 113640944 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04933 243 582 Calmodulin-binding Proteins AT5G65930 38.663 2.49e-68 240
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04933 K10406 - gmx:100779403 901.738