Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g04933 | ATGCAGACTGAGAAGACTAAAAAAGAAGAAAAAAAGGTAGATGATTCAAAACAGATTGAGAAGGCCATAAAGGAAGAAAAGAAGGCAGATAATTCAATACATAGTGAGAAGATTAAGAATGAGGAAAAGAAGATAGAGGACTCAATACAAAATGAGAAGACTAAAATGGAAGAGAAGAAGACAGATGACTTAATACAGACTGAGAAGACTAAAATGGAAGAGAAGAAAGATGTCTCAATACAGACTGAGAAAACTAAAGAGGAGGAAAAGATGGTAGATGATAAAGAAATTATTAGATTGAATAAAGAGCTGGATGACAAAAATATGGAAATTTCAACATTGAAGCAAGAACTAGAAAAAATGAGAAAAACATATGAAGTACAATGCTCACAGTTGGAAGCACATGCTGAGGATGCTAAAGGAGAACTGAAACAGAAATCACAAGAATATGAGAATCAGTTGGAAAGATTAAGAAATAAGGTTAAAGAGAATGAGGCCTTTACTGAGTCTAAATATCAGAAGTGGATCATGAAAGAGAAACAAATACAGAAAGCTGTCACTTTTCAGTTTAGTTCCATACAGAAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGGACAAATGGTTTATGCAGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAGTAGATGCAGCTGAGAATTATCAATCAGTTCTTTCAGAAAATCGAAAACTGTTTAATGAAGTTCAAGAATTAAAAGGAAACATCAGAGTATATTGTAGACTCAGACCATTTCTACCTGGACAGAAGGAAAAGCAGTCTATTGTGGAACACATTGGTGAAACTGATTTGGTTGTGGCAAATCCCTCCAAACAAGGGAAAGAAGCCCTTAAAACATTTAAGTTTAACAAGGTCTTTGATCCAGCCTCAACTCAAGCTGAGGTATATGCTGACATACAAGGCTTTATACGATCAGTACTTGATGGGTATAATGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATGGTGCAACAAGTGAGACTGTTGGTGTTAACTATAGAGCTCTGAATGACCTCTTCAACATATCCTCAAGTAGAAAAAGCTCCATAGTCTATGAAATTGGGGTTCAAATAATTGAGATATATAATGAACAAGTTCGAGATTTGTTATCAGCTGAAGCTTCTCCAAAAAAACTTGGGATATTGAATCACTCTCAACCAAATGGTTTAGCAGTACCTGATGCTAGCATGCAACCTGTGAAATCAACTGCAGATGTCATAAAACTAATGGACATTGGTCTTAAAAATAGAGCCAAGGGTGCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGGTGGATAAGAAATCTGGTTCTTCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGACTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCACTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAGTGCCCATATACCATACAGAAACAGCAAGCTTACTCAACTTTTGCAAACATCACTTGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCTGAATCTTTAAGTACTTTGAAGTTTGCTGAGAGGGTCTCTGGAGTTGAGTTAGGAGCTGCAAGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTGATGGAGCAGGTGGCTTCTCTGAAGGATACTATTTTGACAAAAGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGAACTGAAAAATGTTCAGCCCAATGTCAATTCTGAGAAGCTTGAAACTGCCACCGATTGA | 1932 | 0.369 | MQTEKTKKEEKKVDDSKQIEKAIKEEKKADNSIHSEKIKNEEKKIEDSIQNEKTKMEEKKTDDLIQTEKTKMEEKKDVSIQTEKTKEEEKMVDDKEIIRLNKELDDKNMEISTLKQELEKMRKTYEVQCSQLEAHAEDAKGELKQKSQEYENQLERLRNKVKENEAFTESKYQKWIMKEKQIQKAVTFQFSSIQKLKLSWESIKQDVMKGQMVYAEECNRLGVNLKSLVDAAENYQSVLSENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETDLVVANPSKQGKEALKTFKFNKVFDPASTQAEVYADIQGFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATSETVGVNYRALNDLFNISSSRKSSIVYEIGVQIIEIYNEQVRDLLSAEASPKKLGILNHSQPNGLAVPDASMQPVKSTADVIKLMDIGLKNRAKGATAMNERSSRSHSVVSIHVRGVDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLSQKSAHIPYRNSKLTQLLQTSLGGQAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKELKNVQPNVNSEKLETATD. | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g04933 | 643 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 19 | 624 | IPR027640 | GO:0003777|GO:0007018 | |
Seca10g04933 | 643 | Coils | Coil | 596 | 616 | - | - | |
Seca10g04933 | 643 | Gene3D | Kinesin motor domain | 198 | 584 | IPR036961 | - | |
Seca10g04933 | 643 | Coils | Coil | 24 | 59 | - | - | |
Seca10g04933 | 643 | PRINTS | Kinesin heavy chain signature | 329 | 350 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | PRINTS | Kinesin heavy chain signature | 483 | 501 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | PRINTS | Kinesin heavy chain signature | 452 | 469 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | PRINTS | Kinesin heavy chain signature | 532 | 553 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | FunFam | p-loop containing nucleoside triphosphate hydrolases superfamily protein | 197 | 584 | - | - | |
Seca10g04933 | 643 | Coils | Coil | 235 | 255 | - | - | |
Seca10g04933 | 643 | Coils | Coil | 97 | 167 | - | - | |
Seca10g04933 | 643 | ProSiteProfiles | Kinesin motor domain profile. | 255 | 582 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Seca10g04933 | 643 | Pfam | Kinesin motor domain | 261 | 580 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 255 | 620 | IPR027417 | - | |
Seca10g04933 | 643 | SMART | kinesin_4 | 253 | 590 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca10g04933 | 643 | Gene3D | - | 93 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g04933 | Seca-Chr10 | 113635130 | 113640944 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g04933 | 243 | 582 | Calmodulin-binding Proteins | AT5G65930 | 38.663 | 2.49e-68 | 240 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g04933 | K10406 | - | gmx:100779403 | 901.738 |