Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04929 ATGGCATCCAATAGGAGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTAAATGCTGCAAAAGCTGAAAAATTGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGGTTGCTGAATACCGGGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTGTCAGATAGTAGCGGAGATTCTGGAGCTAATGTCAAGCGACTTGAGGTAGAGACTGAAGCAAAAATCCATCACCTGAAAACAGAGGCTGCAAGGATATCAGATGATGTTGTTGCCATGCTCCTTAAGTACGTAACGAGTGTGAAAAATTAG 333 0.4354 MASNRSQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEAEKEVAEYRAKLELEFQKKVSDSSGDSGANVKRLEVETEAKIHHLKTEAARISDDVVAMLLKYVTSVKN. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04929 110 FunFam V-type proton ATPase subunit G 3 110 - -
Seca10g04929 110 Coils Coil 10 59 - -
Seca10g04929 110 Pfam Vacuolar (H+)-ATPase G subunit 6 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca10g04929 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca10g04929 110 Gene3D - 1 110 - -
Seca10g04929 110 NCBIfam V-type ATPase subunit G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04929 Seca-Chr10 113513353 113515252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04929 9 110 Primary Pumps ATPases(2) AT4G23710 69.608 2.45e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04929 K02152 - gmx:100306550 158.688