Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04911 ATGAGCTTCCTCTCCAAGTTGTGCCCCTGCTTGGAGAACCGTCTGAAGAGGGGCGGCGCAGCCTCCGACGACGTCGATTCCAACGACGCCGACGAATCTTTTAACCTCTTATTCAGCCTCCACACTCTCCAGCTCGCCACCAATTTCTTCTCCAACCTCAACCAGCTCGGCCATGGAGGGTTTGGTCCTGTTTTCAAGGGATTGATGCCAAATGGTCAAGAAGTAGCTGTTAAGAAGCTGGCATTAGAATCTAGACAAGGAATTAAAGAATTTACCAACGAAGTCAAGCTATTGCTAAGACTTCAGCACAAGAACTTGGTTACATTACTAGGTTGTTGTGTAGAAGGACCTGAAAAGATGCTTGTCTATGAGTATCTGCCAAACAAAAGTCTTGATCGCATTCTATTTGATAAAAGGAGGTCTTCATCTTTGGACTGGACAACACGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCAGAAAGAATCATTCACAGAGACATTAAAGCTAGTAACATATTGCTGGATGAGAAACTAAATGCAAAAATTTCAGACTTTGGCTTGGCAAGGCTGTTTCCAGGGGAAGACACTCATGTGCAGACATTTAAGATTGCTGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGTGGATATCTGTCTGTAAAGACAGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGACGCACAGCTTGGTGCAGAAAAGGCAGATCTCTTGAACTATGTAAGTTGA 807 0.4411 MSFLSKLCPCLENRLKRGGAASDDVDSNDADESFNLLFSLHTLQLATNFFSNLNQLGHGGFGPVFKGLMPNGQEVAVKKLALESRQGIKEFTNEVKLLLRLQHKNLVTLLGCCVEGPEKMLVYEYLPNKSLDRILFDKRRSSSLDWTTRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNAKISDFGLARLFPGEDTHVQTFKIAGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDAQLGAEKADLLNYVS. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04911 268 SUPERFAMILY Protein kinase-like (PK-like) 32 253 IPR011009 -
Seca10g04911 268 SMART serkin_6 50 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04911 268 Pfam Protein kinase domain 51 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04911 268 FunFam Lectin-domain containing receptor kinase A4.3 126 268 - -
Seca10g04911 268 ProSiteProfiles Protein kinase domain profile. 50 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04911 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Seca10g04911 268 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 267 - -
Seca10g04911 268 Gene3D Phosphorylase Kinase; domain 1 16 125 - -
Seca10g04911 268 FunFam Cysteine-rich receptor-like protein kinase 2 16 125 - -
Seca10g04911 268 Gene3D Transferase(Phosphotransferase) domain 1 126 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04911 Seca-Chr10 113307082 113310480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04911 16 268 Receptor kinase-like Gene Family AT4G23130 52.326 5.91e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g04911 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04911 - - gmx:100790304 450.669