Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04907 ATGACAGAGAACGACCTCACGATGAAGCAACTCTGCCCCTCCCAAATCCTTAGAATGGAAAATTTCAACTCCTCAATGCACTCCTTAGCCTTTCCAACTCTGAGTCCTCTTCTCTGTCCCTCTGTCGAAATGCTTCTTAAATCGTTGGTAAAGAGGCTTGCTCCAGAGAATCCTCTCCCTGCATGTTACCATGACTGTTGGGCTGCATTTCAATGGGTATCTTCCCATTCTACAAAAATCCCTTGCCCCAACAATGCAGAAACAGAACCATGGTTGATTAACGATGGTGATTTCAACCGAGTTTTCATTGTTGGTGATAGTGCTGGTGGTAACATTGCGCATAACATTGTTATGCGTGCTGGAACTGAGGCTTTACCTGGTGATGTTATAATCTTAGGAGCTATTTTAACTCATCCTAAATTCTATCGTTCATACCCTGTTGTGTCCAAAGATCAATGA 459 0.4314 MTENDLTMKQLCPSQILRMENFNSSMHSLAFPTLSPLLCPSVEMLLKSLVKRLAPENPLPACYHDCWAAFQWVSSHSTKIPCPNNAETEPWLINDGDFNRVFIVGDSAGGNIAHNIVMRAGTEALPGDVIILGAILTHPKFYRSYPVVSKDQ. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04907 152 Gene3D alpha/beta hydrolase 48 152 IPR029058 -
Seca10g04907 152 Pfam alpha/beta hydrolase fold 52 139 IPR013094 GO:0016787
Seca10g04907 152 SUPERFAMILY alpha/beta-Hydrolases 52 142 IPR029058 -
Seca10g04907 152 PANTHER ARYLACETAMIDE DEACETYLASE 48 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04907 Seca-Chr10 113267614 113269693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04907 3 151 Carbohydrate Esterase AT1G49660 33.537 3.68e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04907 - - aprc:113873855 148.288