Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04895 ATGGCGGACTTGAAATCCATCACTAACTACATGATCTCCTCGGATTACACAAAAGAATGCGTAAACGTCTACAACTCCATCCGAAAATCCATCATTCACGAAGGCATTTATCGTCTCAACGTGGAGAAACTAAGCTCCGTGCGTGTCAACAAGATGGATTGGGTATTCCTTGAGTTGAAGATCAAGAATTGGTTAGAGACAATAAGGATCTCAGTTAGGATGTTCTTCAACGGGTCGAGAGAGAATCCTTTGCGATCACGTCTTCTATTTTTCAGAGTCCATAGAGAAGCTTCCATCGCAGAGATTTCAAGGGACCAACCCCTCTTCAATGAAGATGAATCTTTTATTCTAGTTTAG 357 0.4174 MADLKSITNYMISSDYTKECVNVYNSIRKSIIHEGIYRLNVEKLSSVRVNKMDWVFLELKIKNWLETIRISVRMFFNGSRENPLRSRLLFFRVHREASIAEISRDQPLFNEDESFILV. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04895 118 Gene3D Exocyst complex component Exo70 1 106 - -
Seca10g04895 118 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 106 IPR004140 GO:0000145|GO:0006887
Seca10g04895 118 SUPERFAMILY Cullin repeat-like 2 78 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04895 Seca-Chr10 113116549 113116905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04895 1 109 EXO70 exocyst subunit family AT3G09520 46.087 2.09e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04895 K07195 - gmx:100786852 117.087