Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04893 ATGCATCCTCACACCAACAACCCTTTTAACTCTCACTCTCAGGTCCCCAATTCTTCAGGAAAAATGGCTGCTAAAAGGCTTTTTGATGATTCTGATGAAGATCACCCTCATGATAAGCCAAGCGACAAAAGGATGAGACCTAATAGACCTTCTTTTGCTTCTGTAATTGGAGAAGTGGTTATGGTGAAAAACCTGCAGAACCTTTTCTCAGCCTTGGAACCTCTGCTTAAAAGAGTGGTTAGTGAAGAGGTTGAGAGAGTGATGAGACAATGCTGTCCACTCTTCATGACAAGGTCACCTTCATTGAGAATCCAAGCAGCAGAGCAACCATCAACCCTGCAACTCTCATTCAACAAAAGGCTTTCCCTCCCTATCTTCACAGGTAGCAGGATCCTTGACATTGATGGAAACCCCATCCACATAACTCTAATTGACAAAACCAATAATAATGGCCAAGGGGTTCCCACTAGTCTCCCTCATCCAATCAAGCTAGAGATTGTGGTTCTTGATGGAGACTTTCCACCAGGTGATAATAATGAATTAGATTATTGGACTAATGAGCAATTCAATAGCCACATAGTGAAGGAGAGAACAGGGAAGAGACCATTGCTTGCAGGAGAATTGAACCTAACTATGAGGGATGGGATTGCACCAATTGGGGACATAGAGTTCACTGATAACTCTAGCTGGATTAGGAGCAGGAGGTTCAGAGTTGCAGTGAGGGTGACACCAGGGAGTAATCAAGGTGTTAGGATTCAAGAAGGGATGACAGAGGCATTTGTTGTTAAGGATCATCGTGTGTACAAGAAACACCACCCACCAATGCTTCATGATGATGTTTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCATTTCACAGAAAATTGTCCTCAGAAGGGATCAAAACTGTGCAAGACTTTCTCAAATTAGCAGTTGTTGACACTGAAAGGCTAAGACAGTGTTTCTGCTTCCAGATTTTAGGCATTGGAATGTCAGACAAAATGTGGGAAGCCACAATCAAGCATGCAATGACTTGTGAAATGGGGAGCAAGATCTATATATACCGTGGACCTCAATTTACTATTTTTCTGAATCCAATATGCAAATTAATTAGAGCTGATATTAGTGGACAGATATTTTCCAGCAGAGAGCTGATCCATCTGAAGAATAAGGGCTATATAGACAAATTAGTGAGAGAAGCATATGCAAGGTGGCATGCCTTGGAGGAAATTGATGGAGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGTGGAGCAATTTCCAAACAATCATCATCCAGCATCGGTAGTAACATATCAACAGAACAATTATTATGGTGACAAATCTACAGAGGTTGCTAGCTATCTGCCAAGCAATAATGCACAAATAGGAAGCTCTCAGTGGTCACTGAATCATGCCTATACCACAGCATCATTTGCAAATGGCTTCCCTTATGGCTTCTCAGGATCACAATCAGATGGTGACATAACGCCTTCAGGTTCAGGTTCTGTGGATGTTGATGGTGGGGCCACAAGGCAACATTAG 1560 0.4224 MHPHTNNPFNSHSQVPNSSGKMAAKRLFDDSDEDHPHDKPSDKRMRPNRPSFASVIGEVVMVKNLQNLFSALEPLLKRVVSEEVERVMRQCCPLFMTRSPSLRIQAAEQPSTLQLSFNKRLSLPIFTGSRILDIDGNPIHITLIDKTNNNGQGVPTSLPHPIKLEIVVLDGDFPPGDNNELDYWTNEQFNSHIVKERTGKRPLLAGELNLTMRDGIAPIGDIEFTDNSSWIRSRRFRVAVRVTPGSNQGVRIQEGMTEAFVVKDHRVYKKHHPPMLHDDVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAVVDTERLRQCFCFQILGIGMSDKMWEATIKHAMTCEMGSKIYIYRGPQFTIFLNPICKLIRADISGQIFSSRELIHLKNKGYIDKLVREAYARWHALEEIDGVLNDNIALLTQGDQTVEQFPNNHHPASVVTYQQNNYYGDKSTEVASYLPSNNAQIGSSQWSLNHAYTTASFANGFPYGFSGSQSDGDITPSGSGSVDVDGGATRQH. 520
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04893 519 MobiDBLite consensus disorder prediction 25 46 - -
Seca10g04893 519 MobiDBLite consensus disorder prediction 1 20 - -
Seca10g04893 519 PANTHER OS02G0177800 PROTEIN 22 486 IPR012416 GO:0005516
Seca10g04893 519 MobiDBLite consensus disorder prediction 1 49 - -
Seca10g04893 519 Pfam Calmodulin binding protein central domain 275 346 IPR046830 -
Seca10g04893 519 Pfam Calmodulin binding protein C-terminal domain 351 411 IPR046829 -
Seca10g04893 519 Pfam Calmodulin binding protein-like N-terminal domain 113 265 IPR046831 -
Seca10g04893 519 MobiDBLite consensus disorder prediction 496 519 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca10g04893 Seca-Chr10 113056972 113063329 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04893 24 413 Calmodulin-binding Proteins AT5G57580 48.363 6.02e-116 354
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04893 - - gmx:100792405 681.019