Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g04889 | ATGACCAACTCGTTCAAAGATAAACTAGGCCAAGGTGGTTTTGGTGCCGTGTACAAAGGAAAACTACTCAATGGTGGCCTAGTGGCTGTAAAGATATTGAAAGCATCTAAGGGAAATGGTGAAGAATTTATCAATGAGGTTGCTAGCATTAGTAGAACCTCTCATGTTAATATTGTCAACCTTCTTGGATTTTGTTTTGAAGGCCATAAGAAAGCTCTCATCTACGAATTTATTGATTTGAGACCTGATGGGGTGATAGTTACAAGAGAAAATGAGATTGCAAGGAGAATGGCCATTGTGGGTTTGTGGTGCATTCAAACATTTCCAAGTGATAGACCTACAATGACCAGAGTGATTGATATGTTGGAAGGGAGCATGAATTCCTTGGAAATGCCACCAAAACCTTTTCTTTCTTCTCCAACTAGATCAGTATCAGAATCTTCGACTTCTTGA | 453 | 0.3929 | MTNSFKDKLGQGGFGAVYKGKLLNGGLVAVKILKASKGNGEEFINEVASISRTSHVNIVNLLGFCFEGHKKALIYEFIDLRPDGVIVTRENEIARRMAIVGLWCIQTFPSDRPTMTRVIDMLEGSMNSLEMPPKPFLSSPTRSVSESSTS. | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g04889 | 150 | ProSiteProfiles | Protein kinase domain profile. | 3 | 150 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g04889 | 150 | SMART | tyrkin_6 | 3 | 144 | IPR020635 | GO:0004713|GO:0006468 | |
Seca10g04889 | 150 | MobiDBLite | consensus disorder prediction | 132 | 150 | - | - | |
Seca10g04889 | 150 | MobiDBLite | consensus disorder prediction | 130 | 150 | - | - | |
Seca10g04889 | 150 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 77 | - | - | |
Seca10g04889 | 150 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 31 | IPR017441 | GO:0005524 | |
Seca10g04889 | 150 | Pfam | Protein tyrosine and serine/threonine kinase | 5 | 79 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g04889 | 150 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 80 | IPR011009 | - | |
Seca10g04889 | 150 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 89 | 142 | IPR045874 | GO:0004672 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g04889 | Seca-Chr10 | 113026086 | 113027000 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g04889 | 1 | 86 | Receptor kinase-like Gene Family | AT5G38280 | 70.115 | 1.12e-32 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Seca10g04889 | PK_Tyr_Ser-Thr | 3.4e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g04889 | - | - | pmum:103338836 | 135.576 |