Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04878 ATGGATAACCTTAATGATATATCTGGTGTTAATTTAAATGATGATGCATATGGATATGAGCTTGTTAGTTCTGATGATAGTGAAAGTGATGAGGCGATTGATGATAGTGATAGTGATAGTGATGGTCATGGGGATTGTGATGTTGGCAATGAAAATGAGAGTGAAAATGATATTGCCACTAACCATGATGAACATAAGGGTAACAATAACAAAAACAGGGATCCCTTAATTGATGTAGATGGTGAAAAATTTAAAAGCATAGTAGATTTGACTGAAGAAGATATATTAGGACTTGATTTTGGTACTGAACAAGAAGCCTACGAATTTTATAGAACATATGGAAAATGTATAGGTTTTGCTGTAAGGAAAGATGATGTAAAGAGGGATGTTAGGGGGCAGATTAGAATGCAACAGTTTGTCTGCAATAAAGAAGGCGAACGGAACAAAAAACATTTAATGAGGGTTGATAGAAAAAGAGATCATAGGCCGTTGACTCGTACTTCTTGTACTGCTAAGATTCGTGTTCACTACAATATGAAGACAAACAGATGGAAAGTGGTGTCCTTCAAGCAGTCTCATAACCATGAATTATGCCCATCAGTATATAGGCACCTCATCACTGCAAATCGCTGCATTTCGGATGCTGACAAAGCCCAAATTGATAGCTTGCATGAACATGGGGTAAGAACCTGCCACATAATGGGTTATATGGTAGCTCAAAGAGGGGGGTATGGTAATTTGTGTTTTTCGAGAAAGGATGTTTATAATTATCTTGATAGCAAAAATCGTAATCGGATTAAAGGTGGAGACGCTCGTGCAGCGTTAAGTTATCTTCAAGGAAAGTCTAATAGTGACCCCATGTTATATTGCAAGTACACAATTGATGAGAAAAATAGATTGAGGTCACTATTTTGGGCAGATGGTGCTTGCGTATCAGACTACCTGTGCTTTGGTGATGTTATTGCCTTTGACACTACCTATAAGAAAAACAGATACCAGCATCCTTTGGTAATTTTCTCAGGGTGTAATCATCATTCTCAAATCGTTATTTTTGGCTTTGCATTAGTGCCAGATGAGAGAATTGACACATACAAATGGGTCCTTCAAGCTTTTTCAGAAGCAATGTTCAACAAACAACCAAAATCAGTGGTTACTGATGGCGATGGAGCTATGAGAGAAGCCATTAAGCAAGTGTTTCCTAATGCATCACATAGATTGTGTGCTTGGCACTTGCAGAAAAATGCTTGTGAAAATGTTAAGAGACCACCTTTTTTGGAGGACTTTCAGAAAGCTGTGTACTCAAATTTTACCCCTCAACAATTTGAATATTTTTGGGAGAAGATGGTTTTGAAACATGGGCTGGTAGGAAACAATTGGGTGAGTAAAACATATGAGAACAAAGCATTATGGGCCACTGCATATCTTCGAGATAAGTTTTTTGCTCGTATTAGGACTACATCTCAATGTGAGTCTATTAATGCATTTATAAAGGCATATGTAAGGAAGAAGAGTAGCTTTGTTGAATTAATGCATAATACTGATCAAGCATTGAGAGAATACATAAACAATGAAATGATTGCAGATTATAAGTCATTGTTCACAGAACCTGTGTTAACTACATCTTTGTACAAGGTTGAGAAAGAGGCTTCCAAAATCTATACATTAGAAATTTTTAAAGAAGTAAAGCATGAGATTGAAAAGGCTGGTGCGCTAATTGTTATTGATCGAAGGATAATGGGTGATAAGTTGTTGTTCAAACTCAACCAGTATTGTAAACCTGGGAAAGAAAGAAATGTTCAGTATGATTCTGCAAATTCAATTTTTTCCTGTGATTGTAGTCTTTTTGAATCTCGTGGAATACCATGCTCACATATTTTTTGTGCGATGAAAAATGAGCATGTTGATCACATTCCAAGAAGTCTGATCATTGCTCGATGGACAAAGAATGCGAAGAGAAATTTCAGGATAAGTGATGATGTGCAAGAAGTGCCATCTGATGTGAACAGTAGTTGCTGCATTTAG 2022 0.3675 MDNLNDISGVNLNDDAYGYELVSSDDSESDEAIDDSDSDSDGHGDCDVGNENESENDIATNHDEHKGNNNKNRDPLIDVDGEKFKSIVDLTEEDILGLDFGTEQEAYEFYRTYGKCIGFAVRKDDVKRDVRGQIRMQQFVCNKEGERNKKHLMRVDRKRDHRPLTRTSCTAKIRVHYNMKTNRWKVVSFKQSHNHELCPSVYRHLITANRCISDADKAQIDSLHEHGVRTCHIMGYMVAQRGGYGNLCFSRKDVYNYLDSKNRNRIKGGDARAALSYLQGKSNSDPMLYCKYTIDEKNRLRSLFWADGACVSDYLCFGDVIAFDTTYKKNRYQHPLVIFSGCNHHSQIVIFGFALVPDERIDTYKWVLQAFSEAMFNKQPKSVVTDGDGAMREAIKQVFPNASHRLCAWHLQKNACENVKRPPFLEDFQKAVYSNFTPQQFEYFWEKMVLKHGLVGNNWVSKTYENKALWATAYLRDKFFARIRTTSQCESINAFIKAYVRKKSSFVELMHNTDQALREYINNEMIADYKSLFTEPVLTTSLYKVEKEASKIYTLEIFKEVKHEIEKAGALIVIDRRIMGDKLLFKLNQYCKPGKERNVQYDSANSIFSCDCSLFESRGIPCSHIFCAMKNEHVDHIPRSLIIARWTKNAKRNFRISDDVQEVPSDVNSSCCI. 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04878 673 PANTHER OS01G0519700 PROTEIN 92 656 - -
Seca10g04878 673 MobiDBLite consensus disorder prediction 18 77 - -
Seca10g04878 673 Pfam MULE transposase domain 320 414 IPR018289 -
Seca10g04878 673 ProSiteProfiles Zinc finger SWIM-type profile. 595 633 IPR007527 GO:0008270
Seca10g04878 673 MobiDBLite consensus disorder prediction 24 41 - -
Seca10g04878 673 MobiDBLite consensus disorder prediction 42 77 - -
Seca10g04878 673 SMART 26again6 608 635 IPR006564 GO:0008270
Seca10g04878 673 Pfam FAR1 DNA-binding domain 108 198 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04878 Seca-Chr10 112800341 112802362 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g04878 MULE 9.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04878 - - ccaj:109792835 819.305