Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04865 ATGTTAATTATTCTTAGAACGTGGAAATATCAATATGTGATTTTATTCAATGAGGTTGGAGTAATGGGGTGGGATCTCTTTGTGTGCTGCTTCACTAGCACTTCTTCTAAGTTGAAGTGGAAAATCTTCCCCTTTATGCAACTTACAAAAGCCACAAATAATTTTGATGAATGTCATATTCTTGAAAGGAGAGGCTTTGCCGTAGTATATTATGGAAAACTTGAGAATGGACATGAGATTGCAATCCAGCGCTTTAAGGAAGACAACCGCCACATATTGCAACGGTTCATTGATGAACCCGTTATCCTAAATTACATGCCCCACAAAAACCTTGTGTCAATTTATGGGGAAGCCATTCATCAAAAGGAATCCCTGTTAGTACAAGAATACCTATCCAATGGAACTCTTGCTGCTCATCTTCAAGGAAAAATAGCAGAAAGCAGGACATTGCCTTGGCTTACCCGATTGGATATTGCCATTGATACTGCAAATACTTTGGACTATCTTCACTATAATGGCATCATCCATCGTGATGTGAAGTCCAGAAATATTTTCCTTGACATGAATTTTTGTGCTAAAATTGCTAACCTTCATTTATCGCAGAAACTTCCCGAAGGAGTTCCTATAGATGCTACCCATGTTACAAGGGATATAATAGGAACATGTGGTTATATAGACCCAGAGTATGTGTCAAAAGGTTTCCTTAATGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGATTGTATCATCTATGCTTGCAGAATACTGGATTCAGAATGAGGTTGATAGTCTTGCTACCATTTTAAGCACAAAAGTTGAAGACCAAGCTTTGTTGGAGTTCTTCGATCCTGGACTTGGCTTCCAATCCGACCTTAAGATCAAGCAGATGATGATTGCTACCGCTGAGCTTGCGTCTCAGTGCTTGCAATGTCCACTAGGATTAAGGCCAAGTATGGAACAGGTGCTACAGACTCTTAATGGCATAAAGCAAGGGAAATATGAAACAAGTCCGATGAAAACTTTCAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAATCATTTTGACACTTTCCTTGGAAAGGGAGGGTTTGGCACAGTCTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAACGTTTCTATGGGGAGACAGACAAAACCATTAAGCAATTCATGAAAGAAATTGAGATCTTATGTCTCTTGCAACATCAAAATCTGGTTTCACTCTATGGCTGTAGTTCTCGTCATAGCAACAAATACATGCTAGTGTATGAGTACATCTCCAATGGCACTCTTTCTAAGCATCTTCATGATGAATCTTCTTGTGGTAAACTAGCATGGCCTACTAGATTGAATATTGCCATTGAAACTGCAACTGCCTTGGTATATCTTCATGACTCAAGGATCATCCACCGTGACATAAAAGGGAGCAACATTCTGTTGGATGAAAATTTTACTGTCAAAGTAGCAGATTTTGGACTCTCACGGTTTCTTCCAGATCATGTTACACACGTTTCAACTATGGCAGTTGGAACTCGTGCTTACATAGATCCAGACTATTATTTATCTGGAAGGTGGTGGTGCGGCACTAACTTTAGTAGTGGCCTTATGACGTTGGGGTGTGATATGTTGCAATGCTTCTTCACTAGCACTTCTTCTGATTCTGATACATTTCCAGAGAATGAGGATGGTGTTGAGTTAAAGTGGAAAATCTTCGCCTATAATGAACTTGCCAAAGCCACAAACAATTTTGATCCACGCAATTGTTGTGGATGGGGAGACAAGGCCACAATATATTATGGCAAACTTGACAATGGTTGTGAGATTGCAATCCAACACTTTCATGAAGAAAAGCACCAAACATTTCAAAAGTTCATCAAGGAAACTTTGATCCTAAATTACTTGCCCCATAAAAATCTTGTGTCAATTTATGGGCGATCCTCTGATGAAGAACCAATGCTAGTACATGAATACCTCTCCAATGGCACTCTTGCTGGTCGTCTTCAAGGTGACATAGCAGAAAGCAACATGGTACCTTGGCTTACCAGATTGAATATTGCCATTGATACTGCAAATGCATTGGACTATCTTCATGGTTATGGCATCATCCACTCTGATGTAAAGTCCAGCAATATTCTCCTAGATAAGAATTTTTGTGCTAAAGTTTCTAACTTTTTGTTATCACAGAAACTTCCAGAGGGAGTTTCTGCCAATGCTACACATGTTACAAGTGATATAACTGGAATATTTGGTTATATAGATCCAGAGTATGAGCAATATGGCTGTCTTAGTGTGAAAAATGATGTTTATAGCTTTGGGGTGGTGTTATTTGAGCTTATATCATCAAAGCTTGTTAAACATTGGGAAGGGAGTGGTGGTGGTGATAGTCTTGCTATTATGTTAAGCAGAAAAATCCAAAACCAATCACTGGAGGAGCTAGTGGATCCAAGACTTGGCTTCCATTCAGATCCTATCATCAATAAGATGATAATTGATGTAGCTGAGCTTGCAAGTCGGTGCTTGCAATCTCCACAAGAACTAAGGCCATTCATGGGACAGGTACTAGAGACTCTCCATTGCATAAGACAAGAGGGAAAAGAAAAAAACCCCAAAAAAGGTTTCAAATTCTTCAGCCTTGCTGAACTTGAAGAAGCCACTAAAGGTTTTAAGACTTGTCTTGGACAGGGTGGGTTTGGCACTGTTTATTATGGAAGACTTAGAGATGGGCGTAAGATTGCAGTTAAACGTTTTCATGAAGAGACTGACAAGACTGTTAAGCATTTCATGAATGAAATTGACATGCTAAGTGACTTGTGCCATCAAAACCTGGTTTCACTCTATGGCTGCAGTTCCCTAGACAGCAAAGAACACCTTCTAGTGTATGAGTATGTCTCATGTGGCTCTCTTTCTAAGCATCTTAATGGATCTTCTAGCACCAAACTACCATGGCTTACTAGATTGAATATTGCCATTGAGACTGCAACTGCATTGGTGTATCTCCATGATTCAGGTATCATCCACCGTGATGTAAAAGCAAGCAACATTCTCTTGGATGAGAATTTGATGGTTAAAGTTGCAGATTTTGGACTCTCAAGATATTTTCCAGATTTTGTTACCCATGTTTCAACCCTTCCAGTAGGAACTCATGCTTACATAGATCCTGAATATTATCAATCAGGCAGGGTTAGTGACAGAAGTGATGTGTATAGCTTTGGGGTGGTTTTGTTTCAGCTTATATCATCTAAGCCTCCAAATGTCACGGAGGGCACAGATAGTGCCCTTATGAGATTGGGGTGTGATCTGTTGCAATGCTGCTTCACTAGCACTTCTTCTAATACAATTCCAGAGGATGGTATTCGAATGAAGTGGCAAATCTTCCCCTATAGTGAACTTGCCAAAGCCACAAACAATTTTGATCAATTTAATTGTTGTGGATGGGGTGACATGGCAAAAGTATATTATGGCAAACTTGATAATGGGTGTGAGATTGCAATCCAATGTTTTAATGAAGAAAAGCACCAAATATTTCAACAGTTCATCAATGAAACTGTGATCCTAAATTACTTGCCCCATAAAAATCTTGTCTCAATTTATGGATGTGCCTCTGATGAGGAACCTATGCTAGTACATCAATACCTCTCTAATGGCACTCTTGCTGGTCGTCTTCAATGTGACATAGATGAAAGCAGCATGGTACCTTGGTATACCCGATTGGATATTGCCATTGATACTGCAAATGCTTTGGCCTATCTTCACTATAATGGCATCATCCACTCTGATGTAAAGTCCAGCAATATTCTTCTAGATAAAAACTTCTGTGCTAAAGTTTCTAACTTTCTATTGTCAATGAAACTTCCAGAGGGAGTTTCTGCCAATGCTAGACATGTTACAACTGATATAATAGGAACATGTGGTTGTATAGATCCAGAGTATGAGCAATATGGCTGTCTTAGTGTGAAAAATGATGTTTACAGCTTTGGGGTGGTATTGTTTGAGCTTATATCATCAAAACTTGTTAAATATTGGGAAGGGAGTGATGGTGATAGTCTTGCTACTATGTTAAGCAGAAAAATCCAAAACCAATCATTGGAGGAGCTAGTGGATCCAAGAATTGGCTTCCAATCAGATCCTATTGTCAAGCAGATGATAATTGCTGTAGCAGAGCTTGCAACACAGTGTTTGCAGTGTCCACAAGAGCTAAGGCCAACCATGGGACAGGTGCTACAGACTCTCCATTGCATAAGACAAAAGGGATATGAAGAAAACTCAAATAAAGGTTTCAAATTCTTTGGCCTTGCTGAACTTGATGAAGCCACTGAAGGTTTTAAGACTTGTCTTGGAAAGGGTGGGTTTGGCACTGTATATTATGGAAAACTTAGAGATGGCCGTGAGGTTGCAATTAAACGTTTCCATGAAGAGACAGACAAGACTGTTATGCATTTCATGAATGAAATTGACATCCTAAGTGACTTGTGCCATCAAAACCTTGTTTCACTCTATGGCTGCAGTCCCCAAGACAGCAATGAACACCTGCTAGTGTATGAGTATGTCTCATGTGGCACTCTTTCTTTTCATCTTCATGGATCTTCTGGCACCAAACTTCAATGGTTTACTAGATTGAATATTGCCATTGAAACTGCAACTGCATTGGTATATCTTCATGATTCAGGTATCATCCACCGTGATGTAAAAGCAAGCAACATTCTCTTGGATGAGAGTTTCATGGTTAAAGTTGCAGATTTTGGACTCTCACGGTATTTTCCAGACATTGTTACTCATATTTCAACCATTCCAGTAGGTACTCGTCCTTACATAGATCCAGAATACTATAGATATGGAAGGGTTTGTGACAGAAGTGATGTCTATAGCTTTGGGGTGGTCTTGTTTCAGCTTATATCATCCAATCCACCAAGTGTCATGAAGGGTACAGAGTGTGTCACTCCTCTTGCCCTCTTTGCAATGAATAAAATCTTAAATAAGGCATTGGAGGAGTTAGTGGATCCAAATCTTGGGTTTGATTCAGACAAAAACATAATGGAAACAATAACAGCAGTGGCAGAGTTAGCATTTCAGTGCGTACAGTGTCCTAAGGAATTCAGGCCATCCATGAAACAAGTGCTACAGACCTTGGAGGGCATCAAGAAAGGGATATGGTTATTCAACCAGCTAACATAG 5199 0.3958 MLIILRTWKYQYVILFNEVGVMGWDLFVCCFTSTSSKLKWKIFPFMQLTKATNNFDECHILERRGFAVVYYGKLENGHEIAIQRFKEDNRHILQRFIDEPVILNYMPHKNLVSIYGEAIHQKESLLVQEYLSNGTLAAHLQGKIAESRTLPWLTRLDIAIDTANTLDYLHYNGIIHRDVKSRNIFLDMNFCAKIANLHLSQKLPEGVPIDATHVTRDIIGTCGYIDPEYVSKGFLNVKNDVYSFGVVLCEIVSSMLAEYWIQNEVDSLATILSTKVEDQALLEFFDPGLGFQSDLKIKQMMIATAELASQCLQCPLGLRPSMEQVLQTLNGIKQGKYETSPMKTFKIFHHAELEEATNHFDTFLGKGGFGTVYYGKLQDGREVAIKRFYGETDKTIKQFMKEIEILCLLQHQNLVSLYGCSSRHSNKYMLVYEYISNGTLSKHLHDESSCGKLAWPTRLNIAIETATALVYLHDSRIIHRDIKGSNILLDENFTVKVADFGLSRFLPDHVTHVSTMAVGTRAYIDPDYYLSGRWWCGTNFSSGLMTLGCDMLQCFFTSTSSDSDTFPENEDGVELKWKIFAYNELAKATNNFDPRNCCGWGDKATIYYGKLDNGCEIAIQHFHEEKHQTFQKFIKETLILNYLPHKNLVSIYGRSSDEEPMLVHEYLSNGTLAGRLQGDIAESNMVPWLTRLNIAIDTANALDYLHGYGIIHSDVKSSNILLDKNFCAKVSNFLLSQKLPEGVSANATHVTSDITGIFGYIDPEYEQYGCLSVKNDVYSFGVVLFELISSKLVKHWEGSGGGDSLAIMLSRKIQNQSLEELVDPRLGFHSDPIINKMIIDVAELASRCLQSPQELRPFMGQVLETLHCIRQEGKEKNPKKGFKFFSLAELEEATKGFKTCLGQGGFGTVYYGRLRDGRKIAVKRFHEETDKTVKHFMNEIDMLSDLCHQNLVSLYGCSSLDSKEHLLVYEYVSCGSLSKHLNGSSSTKLPWLTRLNIAIETATALVYLHDSGIIHRDVKASNILLDENLMVKVADFGLSRYFPDFVTHVSTLPVGTHAYIDPEYYQSGRVSDRSDVYSFGVVLFQLISSKPPNVTEGTDSALMRLGCDLLQCCFTSTSSNTIPEDGIRMKWQIFPYSELAKATNNFDQFNCCGWGDMAKVYYGKLDNGCEIAIQCFNEEKHQIFQQFINETVILNYLPHKNLVSIYGCASDEEPMLVHQYLSNGTLAGRLQCDIDESSMVPWYTRLDIAIDTANALAYLHYNGIIHSDVKSSNILLDKNFCAKVSNFLLSMKLPEGVSANARHVTTDIIGTCGCIDPEYEQYGCLSVKNDVYSFGVVLFELISSKLVKYWEGSDGDSLATMLSRKIQNQSLEELVDPRIGFQSDPIVKQMIIAVAELATQCLQCPQELRPTMGQVLQTLHCIRQKGYEENSNKGFKFFGLAELDEATEGFKTCLGKGGFGTVYYGKLRDGREVAIKRFHEETDKTVMHFMNEIDILSDLCHQNLVSLYGCSPQDSNEHLLVYEYVSCGTLSFHLHGSSGTKLQWFTRLNIAIETATALVYLHDSGIIHRDVKASNILLDESFMVKVADFGLSRYFPDIVTHISTIPVGTRPYIDPEYYRYGRVCDRSDVYSFGVVLFQLISSNPPSVMKGTECVTPLALFAMNKILNKALEELVDPNLGFDSDKNIMETITAVAELAFQCVQCPKEFRPSMKQVLQTLEGIKKGIWLFNQLT. 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 1131 1423 IPR011009 -
Seca10g04865 1732 ProSitePatterns Protein kinases ATP-binding region signature. 901 923 IPR017441 GO:0005524
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 34 329 IPR011009 -
Seca10g04865 1732 ProSitePatterns Protein kinases ATP-binding region signature. 1454 1476 IPR017441 GO:0005524
Seca10g04865 1732 FunFam Lectin-domain containing receptor kinase A4.3 1525 1730 - -
Seca10g04865 1732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1013 1025 IPR008271 GO:0004672|GO:0006468
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 339 534 IPR011009 -
Seca10g04865 1732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 667 885 - -
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 131 347 - -
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 1221 1434 - -
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 1526 1725 - -
Seca10g04865 1732 SMART serkin_6 1146 1422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SMART serkin_6 895 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SMART serkin_6 358 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SMART serkin_6 1448 1727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SMART serkin_6 592 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SMART serkin_6 55 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 348 434 - -
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 886 971 - -
Seca10g04865 1732 Pfam Protein tyrosine and serine/threonine kinase 599 865 IPR001245 GO:0004672|GO:0006468
Seca10g04865 1732 Pfam Protein tyrosine and serine/threonine kinase 1451 1718 IPR001245 GO:0004672|GO:0006468
Seca10g04865 1732 Pfam Protein tyrosine and serine/threonine kinase 1153 1419 IPR001245 GO:0004672|GO:0006468
Seca10g04865 1732 Pfam Protein tyrosine and serine/threonine kinase 65 266 IPR001245 GO:0004672|GO:0006468
Seca10g04865 1732 Pfam Protein tyrosine and serine/threonine kinase 898 1090 IPR001245 GO:0004672|GO:0006468
Seca10g04865 1732 ProSiteProfiles Protein kinase domain profile. 895 1221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 1121 1220 - -
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 577 870 IPR011009 -
Seca10g04865 1732 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1432 1724 IPR044652 GO:0004672
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 30 130 - -
Seca10g04865 1732 ProSiteProfiles Protein kinase domain profile. 358 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 973 1120 - -
Seca10g04865 1732 Gene3D Transferase(Phosphotransferase) domain 1 435 575 - -
Seca10g04865 1732 ProSiteProfiles Protein kinase domain profile. 1448 1727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 1434 1723 IPR011009 -
Seca10g04865 1732 ProSiteProfiles Protein kinase domain profile. 55 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 576 666 - -
Seca10g04865 1732 Gene3D Phosphorylase Kinase; domain 1 1435 1524 - -
Seca10g04865 1732 Pfam Protein kinase domain 362 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04865 1732 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Seca10g04865 1732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1566 1578 IPR008271 GO:0004672|GO:0006468
Seca10g04865 1732 SUPERFAMILY Protein kinase-like (PK-like) 879 1103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04865 Seca-Chr10 112092701 112106230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04865 573 883 Receptor kinase-like Gene Family AT1G25390 43.631 7.65e-66 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca10g04865 PK_Tyr_Ser-Thr 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04865 - - gmx:100801413 822.002