Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04846 ATGCCTGTTGTTACAGAACACATCAAATGGAGAAGACACAGAAACCATTTCAGGCACCCCATTTCAGAATCTGATCCAACCCCACAAATCCCTTCAATAATCCAATCCACTCGCTGCAAATCTACCATTTCCTCTCTTCTCTCTTCTTTCTCCAACAACAACAACAACACCTCCAATGAAACCACACATACCAGTGGACAGAACAGGAACAAGAAAAAGAAGAAGAACAACATCAACAATAGCAATAGCAACTTTTCTGCAGCAACCTTCAGAGGGCTCGGTTGCACCGCCGGTGCGTCACAGCAGGTGTCGGTTCCGGCGGTGATTCGATCCTCTGCTGATTGGCAAGGGAAGAAGAACAGAAAGAAGAAACACAGAAGGAACAGTAACAGCAACAAGACATGTCATGGGGTTGTTGATGATGGTCCCTGTAATGGTTCTGCTACCTTTCAAGATGTTTGGTGTGGCCCTGGAATTGGATTCTCAACTGATGCTGCTGCCTCTGTGGATTGTGTTGTGGCAAGGAAGAATGTGTCTTCAAGAGGAAAACTTGATGCAGAGAGAATAACACACAGGGAGCGTCCACCTTACTTTGGAAGGCGCACTGTAAACCCAGAAAGTTTGTCATTTTTGGATGATGATTCTGACATTTTTACAGCACGCCCTGGATTAGAGTCTTTTAGCAATGCTAGATTCTATCGCCATGTGCCACATCCTTCCCCTGATGGTCTTGCTGAGCATAACTGTGGGTTTAACCCTGGGGTTAAAGGGTGA 774 0.4574 MPVVTEHIKWRRHRNHFRHPISESDPTPQIPSIIQSTRCKSTISSLLSSFSNNNNNTSNETTHTSGQNRNKKKKKNNINNSNSNFSAATFRGLGCTAGASQQVSVPAVIRSSADWQGKKNRKKKHRRNSNSNKTCHGVVDDGPCNGSATFQDVWCGPGIGFSTDAAASVDCVVARKNVSSRGKLDAERITHRERPPYFGRRTVNPESLSFLDDDSDIFTARPGLESFSNARFYRHVPHPSPDGLAEHNCGFNPGVKG. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04846 257 MobiDBLite consensus disorder prediction 47 65 - -
Seca10g04846 257 MobiDBLite consensus disorder prediction 117 131 - -
Seca10g04846 257 MobiDBLite consensus disorder prediction 110 135 - -
Seca10g04846 257 MobiDBLite consensus disorder prediction 47 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04846 Seca-Chr10 111763386 111765573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04846 4 257 C3H Transcription Factor Family AT1G73760 36.496 9.33e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04846 - - gmx:100818517 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04846 10 111763386 111765573 Seca12g06945 12 161431389 161435498 ECH
Seca10g04846 10 111763386 111765573 Seca10g04846 10 111763386 111765573 ECH