Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04828 ATGCATGCCAAGACAGATTCAGAGGTTACTAGTCTTGCTGCATCATCCCCAACAAGATCCCCTCCTCGCCGTCCCCTCTACTACGTCCAGAGCCCCTCAAGGGACTCTCACGACGGCGAGAAAACCGTCACTACTTCCTTCCACTCTACCCCTGTTCTCAGTCCTGCTGCTTCTCCTCCCCACTCTTCCTCCTCCACTCGCTTCTCTGCCCCACAACGGAAGAAGGACCACCATAGTCTCAAGCAATGGAAGCAAATCGATGTCATCGAGGAAGAAGGCCTTCTTCAAGGGGATGACCGCCACAACACACTACCTCGTCGCTGCTACTTCCTCGCTTTCGTACTTGGCTTTCTCCTTCTCTTTTCTCTCTTCTCCCTCATACTCTGGGGTGCTAGCAGACCCATGAAACCCAAGATTTCCATTAAGAGCATAAAGTTTGATCATGTTAGGGTCCAAGCTGGTTCGGATTCCACTGGGGTAGCCACTGATATGATCACAATGAATTCTACTCTGAAATTCACATACCGCAACACTGGCACGTTCTTTGGGGTCCATGTTAAAGCTACACCTTTAGAATTGTCCTATTCAGAAATCGTGATTGCTTCGGGGAATCAGATGAAGGAGTTTTATCAGTCTAGAAAGAGTCAAAGGCTAGTGAGTGTAGCTGTGATGGGTAACAAGATCCCTCTGTATGGAAGTGGTGCTAGCTTGAGTAGTACAACTGGTGTGCCCACAGTGCCAGTGCCATTGACCCTGAACTTTGTGCTGAGATCCAGAGCTTATGTCCTAGGGAAATTGGTGAAGCCCAAGTACTACAAGAGGATCGATTGTTCCATCAATTTGGATCCCAAGAAGCTCAATGCTCCAATTCCCCTCAAGAATTCTTGCACATATGATTGA 900 0.4833 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTVTTSFHSTPVLSPAASPPHSSSSTRFSAPQRKKDHHSLKQWKQIDVIEEEGLLQGDDRHNTLPRRCYFLAFVLGFLLLFSLFSLILWGASRPMKPKISIKSIKFDHVRVQAGSDSTGVATDMITMNSTLKFTYRNTGTFFGVHVKATPLELSYSEIVIASGNQMKEFYQSRKSQRLVSVAVMGNKIPLYGSGASLSSTTGVPTVPVPLTLNFVLRSRAYVLGKLVKPKYYKRIDCSINLDPKKLNAPIPLKNSCTYD. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04828 299 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 108 284 - -
Seca10g04828 299 MobiDBLite consensus disorder prediction 43 69 - -
Seca10g04828 299 MobiDBLite consensus disorder prediction 1 81 - -
Seca10g04828 299 Pfam Late embryogenesis abundant protein 173 268 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04828 Seca-Chr10 111099093 111101118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04828 - - gmx:100811519 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06910 12 161063620 161065125 Seca10g04828 10 111099093 111101118 PCT