Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04808 ATGGGAGAAGTGAAGCTGATTGCCACTCCTCAAAGCTTCCCTTGTGCCAGAATTGAATGGGCACTAAGGATAAAGGGTGTGGAATATGAGTATATACAAGAAGATTTAGCAAACAAGAGTTCTTTGCTTCTTCAGTCCAACCCTGTTCATAAGAAAGTTCCAGTGCTCCTACATGATGGCAAGCCAATTGCTGAATCACTTGTCATCCTTGAGTATATTGATGAGACATGGAAGGAGAACCCTTTACTACCACTAGACCCATATGAGAAGGCACAGGCTCGTTTCTGGGCAAAGTTTATTGATGAGAAGCAGTGTGTGCTTGGTGTATGGGGAGCTTGTGTGGCCCAAGGAGAAGAGAAGGGGAAAGCTGTAGATGCTGCACTAGAGTCACTGGCATTTCTTGAGAAACAAATTGAAGGGAAGAAATTTTTTGGTGGAGAGAAGATAGGATATCTTGATATTGTAGCTGGCTGGATATCTCATTGGCTCAATGTCCTAGAAGAACTTGGGGACATTGAACTTCTCAATGCTGAGAGGTTCCCATGTCTTCATGAATGGGGACAGAACTTCATCCAGACTTTACCTGTCAAAGATTGCATTCCACCCAGGGAAATGGTGGTTGAATATTTCAGCTTTGGCATCAACTATGTGCGTTCCTTGGCATCCAATAAACCATGA 678 0.4351 MGEVKLIATPQSFPCARIEWALRIKGVEYEYIQEDLANKSSLLLQSNPVHKKVPVLLHDGKPIAESLVILEYIDETWKENPLLPLDPYEKAQARFWAKFIDEKQCVLGVWGACVAQGEEKGKAVDAALESLAFLEKQIEGKKFFGGEKIGYLDIVAGWISHWLNVLEELGDIELLNAERFPCLHEWGQNFIQTLPVKDCIPPREMVVEYFSFGINYVRSLASNKP. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04808 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca10g04808 225 CDD GST_N_Tau 4 77 - -
Seca10g04808 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Seca10g04808 225 Pfam Glutathione S-transferase, N-terminal domain 15 75 IPR004045 -
Seca10g04808 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 208 IPR045073 -
Seca10g04808 225 FunFam Tau class glutathione S-transferase 83 219 - -
Seca10g04808 225 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Seca10g04808 225 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Seca10g04808 225 SFLD Main.3: Omega- and Tau-like 1 211 IPR045073 -
Seca10g04808 225 FunFam Tau class glutathione S-transferase 1 85 - -
Seca10g04808 225 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Seca10g04808 225 Gene3D - 83 218 - -
Seca10g04808 225 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Seca10g04808 225 Gene3D Glutaredoxin 1 82 - -
Seca10g04808 225 Pfam Glutathione S-transferase, C-terminal domain 118 192 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04808 Seca-Chr10 110775761 110777170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04808 3 210 Glutathione S-transferase Gene Family AT2G29420 49.038 7.77e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04808 K00799 - gmx:547587 374.4