Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04792 ATGGGTGGTGGAGGAACACTCGTGGATGGCATTCGTCGATTCTTCCATCGTCGCTCTTCTATTAACTCTCACGTAATTGATCATCACAACAACGACGACGGTGGTGTTGGATGCAATGCTAATAACAACGTTAACAATGACAACAACAACAACAAGAACATTAACTCTTCTTCTTCCTTGAATCTTCTCAAAGTACCTACACGCTCCAATTTAATACCTTCTTCCATGGATCGTAACAAAAAGGGTGCACCAGAGGCAGAGTTTTTTACTGAGTATGGAGAAGCAAATAGGTACCAGATCCATGAAGTGGTTGGAAAAGGAAGTTATGGTGTTGTGGTTTCTGCAGTTGACACTCATACTGGGGAAAAAGTTGCTATTAAGAAAATCAATGATGTTTTTGAGCATGTATCGGATGCCACAAGGATCCTAAGAGAAATTAAACTCCTTCGTTTGCTCCGACATCCTGATATAGTAGAAATTAAGCATATAATGTTTCCTCCTTCACGAAGAGAGTTCAGAGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACTACCAATTTTTCTTGTACCAGCTTCTTCGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGTTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGCAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGCTGAATCTATTTCGAGGATTAGAAATGAGAAGGCTAGAAGATACCTTAGTAGTATGCGAAAAAAGCAACCGGTTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTGGCTCTTCATTTGCTGGAGCGATTACTAGAATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCACTATCTGAGCCTTACTTTCATGGTTTGTCAAGTGTGGACCGTGAACCATCCACTCAACCCATTTCAAAACTAGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCCAAGAATATCTTCAGGGTGGAGAACAAACAAGCTTCATGTATCCGAGCGGGGTTGATCGGTTCAAGCGACAGTTTGCGCATCTTGAGGAGCTTAATGGCAAAGGTGAACGAAGCACTCCATTGCTGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAGAATAATCAAAACAACGATTTTGAACAGCCAACTGGATCAAATCTTCAGAGTCCAGGGTCTGACGTGACACGTAGCCTGTTGAAGAGTGCCAGTATTAGTGGTTCAAAATGTATAGATGTGAAAAAAAGTAAAGATCCAGAGGTATTTAACTCTCTCTTTCAAGTGCTGTCCTTGTGTTGGGTAAAATGGAGAGAAAATCATTACAATATCCGATAA 1704 0.4061 MGGGGTLVDGIRRFFHRRSSINSHVIDHHNNDDGGVGCNANNNVNNDNNNNKNINSSSSLNLLKVPTRSNLIPSSMDRNKKGAPEAEFFTEYGEANRYQIHEVVGKGSYGVVVSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMFPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFSKKFPNADPLALHLLERLLEFDPKDRPTAEEALSEPYFHGLSSVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGGEQTSFMYPSGVDRFKRQFAHLEELNGKGERSTPLLRQHASLPRERVPAPKDENNQNNDFEQPTGSNLQSPGSDVTRSLLKSASISGSKCIDVKKSKDPEVFNSLFQVLSLCWVKWRENHYNIR. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04792 567 SUPERFAMILY Protein kinase-like (PK-like) 92 393 IPR011009 -
Seca10g04792 567 ProSitePatterns MAP kinase signature. 133 236 IPR003527 GO:0004707|GO:0005524|GO:0006468
Seca10g04792 567 FunFam Mitogen-activated protein kinase 413 435 - -
Seca10g04792 567 FunFam Mitogen-activated protein kinase 184 412 - -
Seca10g04792 567 Gene3D Phosphorylase Kinase; domain 1 114 435 - -
Seca10g04792 567 SMART serkin_6 98 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04792 567 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 96 442 - -
Seca10g04792 567 CDD STKc_TDY_MAPK 97 434 - -
Seca10g04792 567 Pfam Protein kinase domain 98 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04792 567 Gene3D Transferase(Phosphotransferase) domain 1 184 412 - -
Seca10g04792 567 MobiDBLite consensus disorder prediction 496 519 - -
Seca10g04792 567 FunFam Mitogen-activated protein kinase 88 192 - -
Seca10g04792 567 MobiDBLite consensus disorder prediction 470 519 - -
Seca10g04792 567 ProSitePatterns Protein kinases ATP-binding region signature. 104 128 IPR017441 GO:0005524
Seca10g04792 567 ProSiteProfiles Protein kinase domain profile. 98 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04792 Seca-Chr10 110268177 110274272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04792 1 543 MAP Kinase Gene Family AT1G73670 73.274 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca10g04792 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04792 - - gmx:100776784 867.455