Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04786 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGGAAATGAACAAGGGTCTTCTTCATCAGAGGGCAACAAGTCTAATCCTGCTTCATCTTCATCTTCTAAGAGGCATTTGCGCTCTAGGCCCCCTCAAAGTTCTGAGCATAAGCCCTTTTCTGGACTCTCCAATTGGTTGCATTCAGTTGCTAATAGGCAGAGTCCTAGTCCTCCTTCTTTGAACCAGACAAGAGGAGAGAGAATGGAGCCATCTGACACAGTGAGCAGCAGTGGTGGTTTGGATGTTGTTTCAGATTCAGCTAGGGGTGATTCAGGGTCTAGTGCTTCCAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAACAGATCAGTTTAGGCTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTTGGATGGTTTCTATGATCTGTATGGAATCTTAACGGAGTCAACCTCTACAACAATGCCTTCCCTTTTAGATCTGCAAGGAAGACCAATCTCTGGCAGTGTCACATGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGCAAAAAGCCCTGGAGTTGACTGTCAAATCAAGACCTGATTCTGCAGTATTTATAGATAGCAATTTGGTGCGCAAGCTTGCCATATTTGTGGCTGACTATATGGGTGGACCAGTTGGAGATCCTGAAAGAATGACAAGAGCATGGAAGAGTCTTAGTTACAGTCTGAAAGCAACCCTTGGTAGCATGGTTTTGCCGCTTGGTTCTCTAACTATTGGATTGGCTCGACATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATCTCGGTTGGTGAAAGGACTGCCATATACAGATTCTGATGATGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGACCCTGGAACTCTTATTCCATCCGATGCAACTGGATCACATATTGAGTATGATGAAACCTTTTCTGTGGCCAGTCCTTTATCAAGAGACCTTGATTCGTCTCATGTACCATCATCTAGCAGTGGGGTTGGAAGTTCTTCTGAAGACACTTCAGATTTTGGGATGCTGGACGGAGCAAACAGATCAAAACATTCTTCCTATGCAGAGAAAGAATCTGACTTAACCAGACCCACCACAGGAAAAGAAGAATCAATGAGACCCTTAAATGAATTCAAAAGTCCCCACAATGTTGAGAAAATCATGGGGCAGAAAGCTCCTGGCAGACCTAATCATCCATATGTGCATACGAGATCTTCTTCTTGGAGTGAAGGGATCAGTTCCCCTGCAGTACGCAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATACTGCCAAGGAGAACCCTCACTTGGCCCAGAAACTTCATAATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTTTCTGATATTTATCATGAGGATTTAGGTTCCCTAACTGAGGCCAACTTACAAACTGAAGAAAAAAATGAACATAAACAGGGAGGTGGACAGCAAAAAACTGAGGTTGATGATAATCTTGGTCCTGCTCGATTTTTGCCTCCTTTGACTCAGTACAGAGTTCACCCTGAAACAAGTTCTAGCAGTCAGCCAGAGCCTTCTAAGCCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTCATACAAGGGAAGCAGCTGGACAGCATATACCACCTCAGGTAAAATATGGAAAAAATGTCCCGGTTGCTGCAGCAGCTGCCGCCGCCGCTGCCGTTGTTGCATCCTCTATGGTAGTTGCTGTGGCAAAGTCAAGTGCTGACTCAAACATTGAGCTTCCAGTAACTGCGGCTGCTACTGCAGCAGCTGTAGTAGCAACTACTGCTGCTGTCACTAAACAGTATGAGCAGAGCATTCGAAGTGATGGAGATACGGACAGTGCTGGTTATGAGCTGAAGGGTAGTGGTGATGGAGAGCATATTGCTTTGGGAGCAAATTTAGAAGGCGAGAGAAGATCTGATAGCTCAGTAGTAAGCAATGATAGCAGAAAATCTGATTCTGCTTTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGCTGGGTGAGCGTATCGGACTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCGTGGAACTGAGGTTGCTGTAAAGAGGTTTCTAGATCAAGATATATCTGGGGAATCACTTGAAGAATTCAAAACTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCGAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATTCACCGGCCAAATAATCAATTAGATGAGCGAAGACGTTTGAGAATGGCCCTCGATACTGCTCGAGGAATGAACTATTTGCACAACTGTAGTCCAACAATAGTTCATCGTGATTTGAAATCTCCAAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCCTGTCACGTTTGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCGTCAAATGAAAAGTGTGACGTTTATAGCTTTGGGGTCATATTGTGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTAGGTTTCCAATACCGCCGTCTTGACATTCCAGATAATATGGACCCTGCCGTTGCAGATATGATTAGGAAATGCTGGCAGACAGATTCAAAGTTGAGACCTACATTTGCTGAAATATTGGCTGCTCTGAAGCCATTACAGAAACCAATTATTGGTTCTCAAGTGCCTCGACCGGTAGCATCAAGTAGGAAAGAGAAGGCTCAGCCATCAGTTGAAGAAGACCAAGAAAGATAG 3096 0.4367 MKNILKKLHIMSNQSGNEQGSSSSEGNKSNPASSSSSKRHLRSRPPQSSEHKPFSGLSNWLHSVANRQSPSPPSLNQTRGERMEPSDTVSSSGGLDVVSDSARGDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESTSTTMPSLLDLQGRPISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSRPDSAVFIDSNLVRKLAIFVADYMGGPVGDPERMTRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPSRLVKGLPYTDSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYDETFSVASPLSRDLDSSHVPSSSSGVGSSSEDTSDFGMLDGANRSKHSSYAEKESDLTRPTTGKEESMRPLNEFKSPHNVEKIMGQKAPGRPNHPYVHTRSSSWSEGISSPAVRRMKVKDVSQYMIDTAKENPHLAQKLHNVLLESGVVAPPNLFSDIYHEDLGSLTEANLQTEEKNEHKQGGGQQKTEVDDNLGPARFLPPLTQYRVHPETSSSSQPEPSKPVEGLGINLPLHTREAAGQHIPPQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSADSNIELPVTAAATAAAVVATTAAVTKQYEQSIRSDGDTDSAGYELKGSGDGEHIALGANLEGERRSDSSVVSNDSRKSDSALDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCSPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRLKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQYRRLDIPDNMDPAVADMIRKCWQTDSKLRPTFAEILAALKPLQKPIIGSQVPRPVASSRKEKAQPSVEEDQER. 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04786 1031 MobiDBLite consensus disorder prediction 382 479 - -
Seca10g04786 1031 MobiDBLite consensus disorder prediction 1 118 - -
Seca10g04786 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 864 876 IPR008271 GO:0004672|GO:0006468
Seca10g04786 1031 Pfam Protein tyrosine and serine/threonine kinase 745 996 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 MobiDBLite consensus disorder prediction 1008 1031 - -
Seca10g04786 1031 MobiDBLite consensus disorder prediction 544 599 - -
Seca10g04786 1031 ProSiteProfiles Protein kinase domain profile. 745 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04786 1031 MobiDBLite consensus disorder prediction 417 447 - -
Seca10g04786 1031 SUPERFAMILY Protein kinase-like (PK-like) 729 996 IPR011009 -
Seca10g04786 1031 MobiDBLite consensus disorder prediction 382 407 - -
Seca10g04786 1031 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 1006 - -
Seca10g04786 1031 MobiDBLite consensus disorder prediction 578 592 - -
Seca10g04786 1031 MobiDBLite consensus disorder prediction 8 108 - -
Seca10g04786 1031 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Seca10g04786 1031 FunFam Serine/threonine-protein kinase isoform 1 736 823 - -
Seca10g04786 1031 ProSitePatterns Protein kinases ATP-binding region signature. 751 772 IPR017441 GO:0005524
Seca10g04786 1031 FunFam Serine/threonine-protein kinase CTR1 824 1007 - -
Seca10g04786 1031 SMART serkin_6 745 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04786 1031 Gene3D Transferase(Phosphotransferase) domain 1 824 1006 - -
Seca10g04786 1031 Gene3D Phosphorylase Kinase; domain 1 738 822 - -
Seca10g04786 1031 CDD STKc_MAP3K-like 751 997 - -
Seca10g04786 1031 PRINTS Tyrosine kinase catalytic domain signature 905 915 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 PRINTS Tyrosine kinase catalytic domain signature 858 876 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 PRINTS Tyrosine kinase catalytic domain signature 819 832 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 PRINTS Tyrosine kinase catalytic domain signature 924 946 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 PRINTS Tyrosine kinase catalytic domain signature 968 990 IPR001245 GO:0004672|GO:0006468
Seca10g04786 1031 MobiDBLite consensus disorder prediction 680 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04786 Seca-Chr10 110125662 110139150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04786 1 1016 MAP Kinase Kinase Kinase AT1G73660 62.086 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Seca10g04786 PK_Tyr_Ser-Thr 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04786 - - gmx:100816332 1548.49