Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04738 ATGATATTTTCAAATGAAGCTAAAGCATATAAGTTCTACAATGAGTATGCTAAATTCATCGGGTTTACTGTGAGAAAAAACCAATACCAAAGATTGGCAGATGGAACTCTAAAGCAGAGGACATTTGTTTGTGGAAAAAAGGGACATAGAAAGCCAAAGGACCCTTCACATGTGAGCAAGATTAATAGGAAAGAAACAATAACGGGTTGTCCAACTATGATATGCTTTACAATTGAAAAGGACAGATCATAA 252 0.3492 MIFSNEAKAYKFYNEYAKFIGFTVRKNQYQRLADGTLKQRTFVCGKKGHRKPKDPSHVSKINRKETITGCPTMICFTIEKDRS. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04738 83 Pfam FAR1 DNA-binding domain 11 80 IPR004330 -
Seca10g04738 83 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04738 Seca-Chr10 108989255 108989506 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g04738 FAR1 8.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04738 - K17604 mesc:110623803 78.5666