Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04709 ATGTGTTTTTGCAGATCCCGCTGGTTCTGGTGCATCTACTGCACAATCTACATCCTTATGTTCACTTTCTTTCTTACCTGCATCATCTTCTGGATAGTAATCTCCCCCTCAAGTGTCAAATTCTACATAACTGATGCCTCCCTCACACAATTCAACCTCACAAGCAACAACACCTTATATTACAACTTCAAGGTCAACATCACAGCAAGAAACCCCAATAACAACATCATAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTATAAAGATAATGACTTTGCTTATGTGAGTTTGACACCCTTTGATCAGGGTCACAAGAACACAACTTTCCTTGGCCCTGTAGTGTTTGAAGGACAGAGTGTGATCAAACTCAAAGCTCAACAACTTGCTGAGTATAATGAGGAGACACTTGTGGGGATTCACAATGACTTGGCTGTGGATTTGGATGTTAGAATTAGAGCTAAGTTTGGAAGGTACAAGAGCAGTCGTTTCAATCCACCAGTTGTGCAGTGTCGACGCTTGAGAGTTCCTTTGATTTCCAATGGTAAATCAGCACCTCCTTTCAGTGTCACAAGATGCAGCAGTGGTGCTTTCTTTACAGATCGTGATGCAGTAGCAGGAGCAGGAGGAGGAGGATATAAATTCTCACACCCTGCAAAATCTGAGTTAACAATGTCAATCTGCAAAGTTGTACATTTGTAA 705 0.417 MCFCRSRWFWCIYCTIYILMFTFFLTCIIFWIVISPSSVKFYITDASLTQFNLTSNNTLYYNFKVNITARNPNNNIIVYYRRITAIAWYKDNDFAYVSLTPFDQGHKNTTFLGPVVFEGQSVIKLKAQQLAEYNEETLVGIHNDLAVDLDVRIRAKFGRYKSSRFNPPVVQCRRLRVPLISNGKSAPPFSVTRCSSGAFFTDRDAVAGAGGGGYKFSHPAKSELTMSICKVVHL. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04709 234 PANTHER OS05G0367900 PROTEIN 11 179 IPR044839 GO:0098542
Seca10g04709 234 Pfam Late embryogenesis abundant protein 66 157 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04709 Seca-Chr10 108115069 108115773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04709 33 179 SNARE and Associated Proteins AT1G32270 31.126 1.27e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04709 - - gmx:100784278 312.768