Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04704 ATGTCTTGCAGATCCCGCTGTTGCTGCTGTTACTGCACAATCTACATCCTAATGTTCATGTTCTTTCTTGCCTGCATCATCTTCTGGATAGCCATCTCCCCCTCAAGTGTCAAGTTCCACATAACTGAGGCCTCTCTCACACAGTTCAACCTCACAAGCAACAACACCTTATATTACAACTTCAAGGTCAACATCACAGCTAGAAACCCCAACAACCATGTCATAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTACAAAGACAATGACTTTGCTTATGTGAGTTTGACACCCTTTGATCAAGGTCATAAGAACACCACTTTCCTTGGCCCTGTAGTGTTTGAAGGACAGAGTGTGATCAAACTCAAAGCTCAACAACTTGCTGAGTATAAGGAGGAAACACTTGTGGGGATTCACAAGGACTTGGCTGTGGATTTGGATCTTAGAATCAGAGCTAAGTTTGGAAGGTTCAAGAGCAATCGTTTCAATCCACCAGTTGTGCAGTGTCGTCGCTTGAGAGTTCCTTTGATTTCCAATGGTAAATCAGCACCTCCTTTCAATGTCACAAGATGTAGCAGTGGTAATTTCTTTAGAGACCGTAATGCAGATGTTGGAACAGCCTGA 627 0.4322 MSCRSRCCCCYCTIYILMFMFFLACIIFWIAISPSSVKFHITEASLTQFNLTSNNTLYYNFKVNITARNPNNHVIVYYRRITAIAWYKDNDFAYVSLTPFDQGHKNTTFLGPVVFEGQSVIKLKAQQLAEYKEETLVGIHKDLAVDLDLRIRAKFGRFKSNRFNPPVVQCRRLRVPLISNGKSAPPFNVTRCSSGNFFRDRNADVGTA. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04704 208 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Seca10g04704 208 PANTHER OS05G0367900 PROTEIN 6 177 IPR044839 GO:0098542
Seca10g04704 208 Pfam Late embryogenesis abundant protein 64 164 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04704 Seca-Chr10 108079226 108079852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04704 32 208 SNARE and Associated Proteins AT1G32270 27.119 6.02e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04704 - - gmx:100784278 315.464