Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g04649 | ATGAGTCACCCAGTATCGCAGCATAACCCGCCCTCATTGCTGCACTCACCGTCACCGGCGATGGACACCGAGACCCTCCAACGACGCCGTCCAAGCAGTGACAGTCACAACAACGCCGTTATCGGAGAGAAAAGACTGAAACGCAGTGAGGTACTGGCAAAGAAGAAAGCCGTTGAAGAACTCATCAGAACAGCTAATGCGAAAAGGGACCACCTCGCTTCTTTCCCCGCCGATCGCCATTTTCAAATAAACGGTCTCTCTGTATGTTTGAAGTCAGGACATGGCAATAAACTGTCCTCTTCTGTTAAACATTATATTCAGGGTCTCCTTAAGCTAAACATGGAAGGACCGTATGGATCTGAGTGGCCAGAAGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGCTCCTGAAGCGCGATATATCTTTGTGCATGAGGTTTCCAATTCAAATGTTGATGATACATCAGCTATATGTCTAGAAGATAGTGGCCCTTTAGTTGGATTTGTACAGTACCGATTTATTTTGGAAGAAGAGATACCAGTGCTTTATGTTTATGAATTACAGCTTGAGCCTCGTGTCCAGGGGAAAGGACTGGGAAGGTTTCTAATGCAACTAATTGAGCTTATGGCCCAAAAGAATTGCATGGGTGCTGTCATGCTAACTGTTCAAAAGGCAAACTTATTAGCTATGAATTTCTATACAAGTAAGCTGAGGTAA | 717 | 0.4477 | MSHPVSQHNPPSLLHSPSPAMDTETLQRRRPSSDSHNNAVIGEKRLKRSEVLAKKKAVEELIRTANAKRDHLASFPADRHFQINGLSVCLKSGHGNKLSSSVKHYIQGLLKLNMEGPYGSEWPEEEKVKRREMVAPEARYIFVHEVSNSNVDDTSAICLEDSGPLVGFVQYRFILEEEIPVLYVYELQLEPRVQGKGLGRFLMQLIELMAQKNCMGAVMLTVQKANLLAMNFYTSKLR. | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g04649 | 238 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 146 | 235 | IPR016181 | - | |
Seca10g04649 | 238 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Seca10g04649 | 238 | PANTHER | N-ALPHA-ACETYLTRANSFERASE 40 | 43 | 238 | IPR039949 | GO:0010485|GO:0043998 | |
Seca10g04649 | 238 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 117 | 238 | IPR000182 | GO:0016747 | |
Seca10g04649 | 238 | Pfam | Acetyltransferase (GNAT) family | 142 | 234 | IPR000182 | GO:0016747 | |
Seca10g04649 | 238 | Gene3D | - | 41 | 237 | - | - | |
Seca10g04649 | 238 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Seca10g04649 | 238 | CDD | NAT_SF | 157 | 221 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g04649 | Seca-Chr10 | 106528804 | 106532691 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Seca10g04649 | Acetyltransf_1 | 2.2e-10 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g04649 | K20794 | - | gmx:100500318 | 335.88 |