Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04649 ATGAGTCACCCAGTATCGCAGCATAACCCGCCCTCATTGCTGCACTCACCGTCACCGGCGATGGACACCGAGACCCTCCAACGACGCCGTCCAAGCAGTGACAGTCACAACAACGCCGTTATCGGAGAGAAAAGACTGAAACGCAGTGAGGTACTGGCAAAGAAGAAAGCCGTTGAAGAACTCATCAGAACAGCTAATGCGAAAAGGGACCACCTCGCTTCTTTCCCCGCCGATCGCCATTTTCAAATAAACGGTCTCTCTGTATGTTTGAAGTCAGGACATGGCAATAAACTGTCCTCTTCTGTTAAACATTATATTCAGGGTCTCCTTAAGCTAAACATGGAAGGACCGTATGGATCTGAGTGGCCAGAAGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGCTCCTGAAGCGCGATATATCTTTGTGCATGAGGTTTCCAATTCAAATGTTGATGATACATCAGCTATATGTCTAGAAGATAGTGGCCCTTTAGTTGGATTTGTACAGTACCGATTTATTTTGGAAGAAGAGATACCAGTGCTTTATGTTTATGAATTACAGCTTGAGCCTCGTGTCCAGGGGAAAGGACTGGGAAGGTTTCTAATGCAACTAATTGAGCTTATGGCCCAAAAGAATTGCATGGGTGCTGTCATGCTAACTGTTCAAAAGGCAAACTTATTAGCTATGAATTTCTATACAAGTAAGCTGAGGTAA 717 0.4477 MSHPVSQHNPPSLLHSPSPAMDTETLQRRRPSSDSHNNAVIGEKRLKRSEVLAKKKAVEELIRTANAKRDHLASFPADRHFQINGLSVCLKSGHGNKLSSSVKHYIQGLLKLNMEGPYGSEWPEEEKVKRREMVAPEARYIFVHEVSNSNVDDTSAICLEDSGPLVGFVQYRFILEEEIPVLYVYELQLEPRVQGKGLGRFLMQLIELMAQKNCMGAVMLTVQKANLLAMNFYTSKLR. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04649 238 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 146 235 IPR016181 -
Seca10g04649 238 MobiDBLite consensus disorder prediction 1 42 - -
Seca10g04649 238 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 43 238 IPR039949 GO:0010485|GO:0043998
Seca10g04649 238 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 117 238 IPR000182 GO:0016747
Seca10g04649 238 Pfam Acetyltransferase (GNAT) family 142 234 IPR000182 GO:0016747
Seca10g04649 238 Gene3D - 41 237 - -
Seca10g04649 238 MobiDBLite consensus disorder prediction 1 39 - -
Seca10g04649 238 CDD NAT_SF 157 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04649 Seca-Chr10 106528804 106532691 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g04649 Acetyltransf_1 2.2e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04649 K20794 - gmx:100500318 335.88