Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04643 ATGGATGGTGACAATGGTCTTAACATACGAAATTGGGGTTACTATGAACCTGCTACCTCCTTTAAGAGCCATCTGGGGCTGCAGCTGATGTCTTCCATGCCAGAAAAACCTCTGCTTGGAGGACGCAATGCCGCAGTTTTGTCTGGTACTAATGGGGCATTTCACCATAGGGACATTGGGATGCCCCAAGCTACATACCCTATGGATTATATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCTAATTATGGTGCTATTCCGGAGACATCTTCAGCACATCATATTCAAATGATTCAACAACCTGAGTTGCCAAAGGAAGAAAGGCCAATGGAAGAGGCACCTGTTGTTGAGAAGCCAAACAACACGGGTAAGAAAAGGCAGGGGCAAAAGATGCCCAAATCCCCCAAGGCAAAGAAGCCTAAGAGGGGCCCTCGCGTGCCAAAGGATGAGAATACACCTTCAGTTCAACGGGCCAGGGTTCCGAAGAAAACTACTGAAATTGTTATAAATGGGATTGATCTGGATATTTCCAGTATTCCAATTCCTGTTTGTTCCTGCACTGGGACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGCTGCACAACAGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGCGCTAGGATAGCTGGGAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTACTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 849 0.4535 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAFHHRDIGMPQATYPMDYMRDAWISSQREKYMNMIPTNPNYGAIPETSSAHHIQMIQQPELPKEERPMEEAPVVEKPNNTGKKRQGQKMPKSPKAKKPKRGPRVPKDENTPSVQRARVPKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFTNPIDLRTYWAKHGTNKFVTIR. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04643 282 MobiDBLite consensus disorder prediction 113 172 - -
Seca10g04643 282 PANTHER - 1 282 IPR010409 -
Seca10g04643 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Seca10g04643 282 SMART GAGA_bind_2 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04643 Seca-Chr10 106416759 106418878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04643 1 282 BBR or BPC Transcription factor family AT2G01930 52.508 5.62e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Seca10g04643 GAGA_bind 7.1e-112 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04643 - - gmx:606296 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04643 10 106416759 106418878 Seca10g04643 10 106416759 106418878 ECH