Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g04634 | ATGGATCAGTCACCTTCCTCCTCCTCTTCCTTCACCTATGATGTATTCCTTAGCTTTAGAGGCACTGATACTCGCCATGGTTTTACTGGCAATCTCTGGAAAGCACTTTGTGGAAAGGGAATCCACACCTTCATTGATGATGAGGAACTTCAAAGAGGACAAGAAATCACACCATCACTTCTCAAAGATATTGAAGACTCCAAAATTGCCATCATTGTGCTCTCTGAGAATTATGCATCTTCATCTTTTTGCTTAGATGAACTTTCAAAGATCATTGATTGCATCCAGGGAAAGGGTCGATTGGTTTTGCCAATTTTTTATAATGTGGATCCTTCTCATGTGCGAAAACAGAAAGGGACTTTTGGAGAGGCAATGACTATGCATAAGAAGAACTTCAATGGTAACATGGATAGGTTGCTGAAATGGAAGACAGCTCTAGAGCAAGTAGCCAACTTGTCTGGTTGGCATTTCAAACTTGGCAGGAATGAATATGAACATGAGTTTATAACGAAGATTGTTAAAGTGGTTTCCAACAAGATTAATCGTGTTCCTTTACATGTTGCGGATTACCCAGTTGGATTGGAATCTCAAGTGCTAAAAGTGAACTTGCTTTTGGATGTTGCATATGATGATAGAGTCCACATGGTAGGGATCTGTGGAATTGGAGGAATGGGTAAAACAACTCTTGCTCGAGCTGTTTATAATTCTATTCCTGACCATTTTGAAGGCTTATGTTTTCTTGATAATGTGAGAGAAAATTCAATTAAACATGGATTGGAACATCTCCAAGAGATGCTTCTTTTTGAAATACTTGGAGGGAAGGATATTAAGATCGGAAGTGTTAATAAAGGAATTTCAATAATAAAGCATAGGCTACAGAAAAAGAAGGTTCTTTTGATTTTGGATGATGTTGATGAATTGGAGCAATTGAAGGTTATGGCTGGAGGACTCAATTGGTTTGGTCCTGGCAGCAGAGTAATCATTACCACTCGGGACCGACATTTGCTTGTAGCACCCGGGGTTAAAAAAATCTATAAGGTACATGGGTTAAATAAGAATGATGCTCTTGATTTGTTTATGAGGAATGCTTTTAAAAATAAGAAAGTTGATCCAAGTTACAAGGAAATTTCAAACCGTGCAGTGACTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTGTGGAAAAGGCATAAAAGTATGGAAATCTACATTAGATCGGTATGAAAGGATTCCTCCTAAAGATATCCAAAAGATACTAAAAGTAAGCTATGATGGTTTGGAGGAAGATGTGCAGAGTGTTTTCCTTGACATTGCATGTTGTTTCAAGGGATGTTATTTGGAAGAGGTCCAAAATATGCTTCATGGTCATTATGGTTATTGCATAGAACTTCATATTGCAGTGTTGGTTGAAAAATCTCTCATAAAGAGTAGTCGGAGGAATACTGTGACACTGCATGACTTGATAGAGGACATGGGTAAAGAAATTGTCCGACAGGAATCACCGGAAGAGCCTGGGAAGCGTAGTAGATTATGGTTCACTAAAGATATAGCTCAGGTTTTAGAAGACAAGACGGGCACTGGTAAAATTCAAATGATATCTATGGATTCCCCCTTGGTTGAAGAAATAGAATGGGATGGACATGCCTTCGAGAAGATGGAAAACCTCAAAACACTTATTGTCAGAAATGGTTGTTTTTCCGAAGACCCCAAACATCTTTCAAATAGTCTGAGAGTACTGGAATGGAAGGGATATCCTTTACAGTATTTTCCATCTGATTTTCATGCAAAGAAACTTATCATATGCAAGTTGCCCAATAGTTGCTTCACGTCATTCAAGTTTGCTGGTTCATTGAAGAAGCAATTCGTGAATTTGAAAGATCTAAATTTTGACGAATGTGAATATTTAAAAAAGATACCTGAAGTATCCGCTCTGAAAAATTTAGAAAATTTCTTATTTCGAAATTGTGTGAACTTAACTAGAATTCATCATTCGGTTGGGTCACTGGATAAACTAAAAGTCTTGAGAGCTAGTGGTTGCAGCAGGCTTAGGAGTTTTCCACCCATCAAGTTAACCTCTCTTGAGGATCTAGACCTTTCACAGTGCAATAATTTCACAACTGTTCCTGAATGCATAAAAAAATTTCACTTTTTAGAGAAGCTATATTTGGATAATTGCAAGCATCTTGAAGAAATTAGAGGGATTCCACCAAACATGGAATATCTCTCTGCAATGAACTGCAAATCCTTGACTTCCTCGAGTAGAAGCATGTTATTGAATCAGGAACTCCATAAGGCTGGAAATACCGAGTTTTGTTTGCCAGGACTAAGAATTCCAGAGTGGTTCACGCACCGAAGTAGTGGCCAGTCAATTTCTTTATGGTTTCGTAATAAATTCCCTGCCATAACTCTCTGCCTTGTTAGTCAACTGATGCATAAATGGGGACCCATTAGGTATTCTGATGTTATTGTAGTCACTCTGACCATCAATGGCTGTGAACATTATAATATACTCTCTTTCATGTTTCCGGATCATACAAATCTTGTTGATTTTCAGAAGCTTATATCTGCAAATAAACTAGATATAGCATTTTCAGAAGATAAATGGAACCATGCAGAGATTGCATTTAAGGCTTGGAACAATGTCCTAATCCATGTAGAAAGTGGAATCTGTGTATTGGAAAAGAAATGTATCATGGAGGATGTTCGATTCACTGATCCTTGTAGGAAAAGAAAATTAGAGGATGATCTCAACAGATTAGAATCACAAAACCACCTGTTGCTGAAAAAGCATAGAATAGAGGGCATTCAAGTTGTGGAGGAGCAGCAACTTTACGCTTTATTATCACTGCAACAACTAGTGTCAATGGTATTAAGGCGGATAAGGGGCACCGCTAGTGTCAAAGGTAAATTCACCTTTGGTGTGCTATCACAGTAA | 2952 | 0.3811 | MDQSPSSSSSFTYDVFLSFRGTDTRHGFTGNLWKALCGKGIHTFIDDEELQRGQEITPSLLKDIEDSKIAIIVLSENYASSSFCLDELSKIIDCIQGKGRLVLPIFYNVDPSHVRKQKGTFGEAMTMHKKNFNGNMDRLLKWKTALEQVANLSGWHFKLGRNEYEHEFITKIVKVVSNKINRVPLHVADYPVGLESQVLKVNLLLDVAYDDRVHMVGICGIGGMGKTTLARAVYNSIPDHFEGLCFLDNVRENSIKHGLEHLQEMLLFEILGGKDIKIGSVNKGISIIKHRLQKKKVLLILDDVDELEQLKVMAGGLNWFGPGSRVIITTRDRHLLVAPGVKKIYKVHGLNKNDALDLFMRNAFKNKKVDPSYKEISNRAVTYASGLPLALEVIGSNLCGKGIKVWKSTLDRYERIPPKDIQKILKVSYDGLEEDVQSVFLDIACCFKGCYLEEVQNMLHGHYGYCIELHIAVLVEKSLIKSSRRNTVTLHDLIEDMGKEIVRQESPEEPGKRSRLWFTKDIAQVLEDKTGTGKIQMISMDSPLVEEIEWDGHAFEKMENLKTLIVRNGCFSEDPKHLSNSLRVLEWKGYPLQYFPSDFHAKKLIICKLPNSCFTSFKFAGSLKKQFVNLKDLNFDECEYLKKIPEVSALKNLENFLFRNCVNLTRIHHSVGSLDKLKVLRASGCSRLRSFPPIKLTSLEDLDLSQCNNFTTVPECIKKFHFLEKLYLDNCKHLEEIRGIPPNMEYLSAMNCKSLTSSSRSMLLNQELHKAGNTEFCLPGLRIPEWFTHRSSGQSISLWFRNKFPAITLCLVSQLMHKWGPIRYSDVIVVTLTINGCEHYNILSFMFPDHTNLVDFQKLISANKLDIAFSEDKWNHAEIAFKAWNNVLIHVESGICVLEKKCIMEDVRFTDPCRKRKLEDDLNRLESQNHLLLKKHRIEGIQVVEEQQLYALLSLQQLVSMVLRRIRGTASVKGKFTFGVLSQ. | 984 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g04634 | 983 | Gene3D | - | 349 | 433 | IPR042197 | - | |
Seca10g04634 | 983 | Pfam | C-JID domain | 778 | 882 | IPR045344 | - | |
Seca10g04634 | 983 | Gene3D | - | 10 | 180 | IPR035897 | - | |
Seca10g04634 | 983 | SUPERFAMILY | L domain-like | 504 | 801 | - | - | |
Seca10g04634 | 983 | Pfam | NB-ARC domain | 210 | 432 | IPR002182 | GO:0043531 | |
Seca10g04634 | 983 | SMART | AAA_5 | 212 | 350 | IPR003593 | GO:0016887 | |
Seca10g04634 | 983 | SUPERFAMILY | "Winged helix" DNA-binding domain | 420 | 527 | IPR036390 | - | |
Seca10g04634 | 983 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 155 | IPR035897 | - | |
Seca10g04634 | 983 | Coils | Coil | 915 | 935 | - | - | |
Seca10g04634 | 983 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 9 | 182 | - | - | |
Seca10g04634 | 983 | ProSiteProfiles | TIR domain profile. | 11 | 180 | IPR000157 | GO:0007165 | |
Seca10g04634 | 983 | Gene3D | - | 181 | 343 | IPR027417 | - | |
Seca10g04634 | 983 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 443 | IPR027417 | - | |
Seca10g04634 | 983 | PRINTS | Disease resistance protein signature | 215 | 230 | - | - | |
Seca10g04634 | 983 | PRINTS | Disease resistance protein signature | 694 | 710 | - | - | |
Seca10g04634 | 983 | PRINTS | Disease resistance protein signature | 291 | 305 | - | - | |
Seca10g04634 | 983 | PRINTS | Disease resistance protein signature | 384 | 398 | - | - | |
Seca10g04634 | 983 | SMART | till_3 | 12 | 152 | IPR000157 | GO:0007165 | |
Seca10g04634 | 983 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 13 | 756 | IPR044974 | GO:0006952 | |
Seca10g04634 | 983 | Gene3D | Ribonuclease Inhibitor | 695 | 772 | IPR032675 | - | |
Seca10g04634 | 983 | Gene3D | Ribonuclease Inhibitor | 546 | 694 | IPR032675 | - | |
Seca10g04634 | 983 | Pfam | TIR domain | 13 | 182 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g04634 | Seca-Chr10 | 106181229 | 106185275 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g04634 | 5 | 762 | WRKY Transcription Factor Family | AT4G12020 | 29.419 | 3.54e-76 | 272 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g04634 | - | - | gmx:100814962 | 908.286 |