Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04617 ATGGGTTACATCCCTTGCTTTTTCTGGTTGCTCCTCCAATCTTCTTGGACTCCTTTGCTTGTTATAATTTTTGGTTTTACAATTATCAAAGCCTTAACCAATCACTTTATTGAGAAGTCCAATAAACCAAAATTGCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAAGCCTGCACCTCAGTGGATACATAAGCTGATGAAAGAAATGAACACCGAAATTGCATGTATCAGCCTAGGAAATGTCCAAGTAATCCCTGTAACTTGCCCTGAAATAGCTTGTGAATTCTTGAGAAAACATGATGCAAATTTTGCATCAAGACCAAAAACCATGGCCACTGATATCATCAGTGGTGGTTATTTGACGATAGCTATTACACCCTTTGGGGAACAATGGGAGAAAATGAAGAAAATCTTTGTCAATAAATTGTTCTCCCCAGTCCAGCATAAATGGCTTCAAGACAAAAGGAATGAAGAGGCTGATAACCTCATCTTTTATGTCTACAATAAATGCAAAAATTTGAATGATGATATTGGCCTTGTAAATGTCAGAACCGCTACAAGACATTATTGTAGTAACGTGATGAGGAAACTTGTTTTTAACAAAAGGTACTTTGGGAAAGGTAGGGAGGATGGAGGGCCTGGTCTTGAGGAAACAGAATATGTAAATGCCCTTTTCACATTGCTTAGACACGTTTTTGCCTTTTGTGTTTCTGACTATATGCCAATCTTGAGGGGTATTGACTTGGATGGTCATGAGAGAAAGGTGAAAAATACCATGAAGATAGTGAAAAAGTATAATGATCCCATCATTGAACAGAGAATTAAAAAATGGAAGGAGGGATCAATGACTGCTAATGAAGCAGAGGACATTCTTGATATACTAATCTCCTTGAAAGATGCCAACAATAAACCATTATTGACAATCGAGGAGATCAAGGCGCAAAGTTTGGAACTTGTACTTGGAGGAGTGGACAATCCATCAAATGCAGCGGAATGGGCACTGGCAGAAATGATAAATCAACCAGATTTGCTTCAGCGAGCCATTGAAGAATTGGACAATGTTGTAGGTAAAGAGAGGCTGGTTCAGGAATCAGATATTCCAAAACTCAATTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCAGTTAATACTTTTAATCTCCCCCATGTCTGTATGAATGAAACAAAAGTTGGCAATTACTTGATCCCAAAGGGTAGCCATGTGTTACTAAGCAAACAAGGTCTTGGAAGAAACTCAAAAGTATGGAATGAGCCCCTTAAGTTTAGGCCAGAACGCCATCTACAAAATGATGGATCCATGATAGTTTTAGGAGAGCCAGATTTAAGATTCATATCATTTAGTACAGGAAAGCGAGCTTGTCCTGGAACTGTTCTTGGCACCACAATGACTGTGATGTTATTGGGTAGGTTGCTTCATGGCTTCACTTGGACTGCACCTCCTAACATGTCAAGCATCAAACTTGACAAGTCCAACGGTGAAATTTTCCTTACGGGACCAGTTATGGCGGTTGCAAAGCCAAGATTAGCACCAGAATTGTACCGCCTACAAGTTAAGTGA 1614 0.3984 MGYIPCFFWLLLQSSWTPLLVIIFGFTIIKALTNHFIEKSNKPKLPPGPKPWPIVGNLPEMLANKPAPQWIHKLMKEMNTEIACISLGNVQVIPVTCPEIACEFLRKHDANFASRPKTMATDIISGGYLTIAITPFGEQWEKMKKIFVNKLFSPVQHKWLQDKRNEEADNLIFYVYNKCKNLNDDIGLVNVRTATRHYCSNVMRKLVFNKRYFGKGREDGGPGLEETEYVNALFTLLRHVFAFCVSDYMPILRGIDLDGHERKVKNTMKIVKKYNDPIIEQRIKKWKEGSMTANEAEDILDILISLKDANNKPLLTIEEIKAQSLELVLGGVDNPSNAAEWALAEMINQPDLLQRAIEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPVNTFNLPHVCMNETKVGNYLIPKGSHVLLSKQGLGRNSKVWNEPLKFRPERHLQNDGSMIVLGEPDLRFISFSTGKRACPGTVLGTTMTVMLLGRLLHGFTWTAPPNMSSIKLDKSNGEIFLTGPVMAVAKPRLAPELYRLQVK. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04617 537 SUPERFAMILY Cytochrome P450 46 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 CDD CYP79 80 527 - -
Seca10g04617 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Seca10g04617 537 FunFam Cytochrome P450 9 38 530 - -
Seca10g04617 537 Pfam Cytochrome P450 46 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04617 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 19 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04617 Seca-Chr10 105358798 105361934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04617 7 532 Cytochrome P450 AT4G39950 53.321 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04617 - K12153 gmx:100787378 746.503