Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04615 ATGGGTTACATCCCTTGTTTTTTCTGGTTACTCCTCCAATCTTCTTGGACTCCTTTGCTTGTTATAATTTTTGGTTTTACGATTATCAAAGCCTTAACCAATCACTTTATTGAGAAGCCCAATAAACCAAAATTACCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGGAAACAATCCTGCACCTCAGTGGATACATAAGCTGATGAAAGAAATGAACACCGAAATTGCATGTATCAGCCTAGGAAATGTCCAAGTAATCCCTGTAACTTGCCCTGAAATAGCTTGTGAATTCTTGAGAAAACATGATGCAAATTTTGCATCAAGACCAAAAACCATGGCCACTGATATCATCAGTGGTGGTTATTTGACGATAGCTATTACACCCTTTGGGGAACAATGGGAGAAAATGAAGAAAATCTTTGTCAACAAATTGTTCTCCCCACTCAAGCATAAATGGCTTCAAGACAAAAGGAATGAAGAAGCTGATAACCTCATCTTTTATGTCTACAATAAATGCAAAAATTTGAATGATGATCTTGGCCTTGTAAATGTCAGAACTGCTACAAGACATTATTGTAGTAACATGATGAGGAAACTTGTTTTTAATACAAGGTACTTTGGGAAAGGTAGGGAGGATGGAGGGCCTGGTCTTGAGGAATCAGAATATGTAGATGCCATTTTCACATTGCTTAAACACGTTTATGCCTTTTGTGTTTCTGACTATATGCCAATCTTGAGGGGTATTGACTTGGATGGTCATGAGAGAAAGGTGAAGAATGCCATCAGGATAGTGAAGAAGTATAATGATCCCATCGTTGAACAGAGAATTGAAAAATGGAAGGATGGATCAATGACTGCTAATGATGCAGAGGACATTCTTGATATATTGATCTCCCTTAAAGATACCAACAATAAACCAATATTGAATATAGAGGAGATCAAGGCGCAAAGTCTGGAACTTGTACTTGGAGGAGTGGACAATCCATCAAATGCAGCGGAATGGGCACTTGCAGAAATGATAAATCAACCAGATTTGCTTCAGCGAACCACTGAAGAATTGGACAATGTTGTAGGTAAACAGAGGTTGGTTCTTGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCAATTAATCCTTTTAATCCACCCCATGTCTGTATGAACGAAACAAAAGTTGGCAATTACTTAATCCCAAAGGGTAGCCATGTGTTGCTAAGCAAACAAGGCCTTGGAAGAAACTCAAAAGTATGGGATGAGCCCCTTAAGTTTATGCCAGAACGCCACCTAAAAAGTGATGGTTCCATGATAGTTTTAGCAGAGCCAGATTTAAGGTTCATATCATTCAGTACAGGAAAGCGAGCTTGTCCTGGAATTGTGCTTGGCACCACAATGACTGTGATGTTATTGGGTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCTCCTAACATCTCAAGCATCAAACTTGACAAGTCCAACGGTGAAATTTTTCTTACTGGACCACTTGTGGCAGTTGCAAAGCCAAGATTAGCACCAGAATTGTATCACCTACAAATTAAGTGA 1614 0.3965 MGYIPCFFWLLLQSSWTPLLVIIFGFTIIKALTNHFIEKPNKPKLPPGPKPWPIVGNLPEMLGNNPAPQWIHKLMKEMNTEIACISLGNVQVIPVTCPEIACEFLRKHDANFASRPKTMATDIISGGYLTIAITPFGEQWEKMKKIFVNKLFSPLKHKWLQDKRNEEADNLIFYVYNKCKNLNDDLGLVNVRTATRHYCSNMMRKLVFNTRYFGKGREDGGPGLEESEYVDAIFTLLKHVYAFCVSDYMPILRGIDLDGHERKVKNAIRIVKKYNDPIVEQRIEKWKDGSMTANDAEDILDILISLKDTNNKPILNIEEIKAQSLELVLGGVDNPSNAAEWALAEMINQPDLLQRTTEELDNVVGKQRLVLESDIPKLNYVKACAREAFRLHPINPFNPPHVCMNETKVGNYLIPKGSHVLLSKQGLGRNSKVWDEPLKFMPERHLKSDGSMIVLAEPDLRFISFSTGKRACPGIVLGTTMTVMLLGRLLHGFTWSAPPNISSIKLDKSNGEIFLTGPLVAVAKPRLAPELYHLQIK. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04615 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 19 533 - -
Seca10g04615 537 Gene3D Cytochrome P450 33 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 FunFam Cytochrome P450 9 38 530 - -
Seca10g04615 537 SUPERFAMILY Cytochrome P450 46 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 CDD CYP79 80 527 - -
Seca10g04615 537 Pfam Cytochrome P450 46 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04615 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04615 Seca-Chr10 105298601 105300750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04615 17 532 Cytochrome P450 AT5G05260 53.321 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04615 - K12153 gmx:100787378 758.444