Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04593 ATGGCTGAGTTTCAGAAAGATGAGGTGCCAATGCTGTCAGATACTCATCCCAAACTATCAAATGAACCTGCGGATTCAAAATTCCAGAGACTTGTACCTAGGACCCGAAGTGTATCAATTTCTATTCCCATGATCCCTCTGGAGCCATATGAAATAAATACTAATCTTGTGGGACACACTGGTCCCCTAAAGAGTCAAAGAAAAACTCCATTTAATCAAATGAGTGGTCCATTATATATTACCCATAGACCTGGAAACCTTTTCTGGCAGAATATGGTAGCACCAGGGAATAAAGCAGTGGAAAGTAAGACAGAAGATTTTCCTTCATCCTGTGCCATGAGTGAAAATGATTTGCAGAACAACTATGCTGGTAAAAATGAACATTTAGTAAGGTCTGGTCAACTGGGAATGTGTAATGATCCATATTGTACAACTTGCCCAACTTACTTCAAGGCGACTCAACAAAGGGATTCAAAAGCTTCGGGTATATTCAATCCTAAGTTTCACAATTCCCTTTATGGGGATGCCAAGGGTTGGGCAAGAAGACTCTTTGCTTTCTTGATTCCACATGTTCCTAGAGTTATGAATCCTCATACTAAACTTGTACAACAATGGAACAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTCTGTGCAGAAGGAAGATAAATGTATTGTTATAAACTCAACTATGAAAACAGTGCTTGTTTTACTTAGAAGCATGAATGATTTCATATACTTCCTAAACATTATTCTTCAGATAATCATATTGTTTGTCCTACCAAAACACTTGGGATCATCAGGAGCAAACTATGCAAAGAATATTTTGCGTGCTGTGGTCCTTGTTCAGTATATTCCCAGATTGTGTAGATTTATTCCTATGCTAATATCTCCAACCGGATTCATATTTGAGTCAGCATGGGAAAGTTTCTTTATAAATCTTTTTATCTTTATGCTATCAGGCCATGTTGTTGGATCATGGTGTACCAAAGAATATCAAATTGATGCAAATTGGAACCAATGGAAGAACAATGCTAATGCAAGTGCTTGTTTTACTGAAGATGGTTTTGATTATGGGATCTATCTTAAAGCTGTCAACCTTACTTCAGATCATCATGTGGTCACTAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGTAATTTAACTCCAAGCTATTTTGTTTGGGAAGTCCTTTTCACCATGGCCATCATAGGAATGGGACTCTTGCTTTTTGCTCTTCTCATTGGGAACATACAGAACTTTCTTCAAGCTCTTGGACGCAGGAGGCTAGAAATGTCACTTAGACGACGTGATGTTGAGCAATGGATGAGCCATAGGCGCCTAGCGGATGATCTGAGAAGGAGAGTGAGACAGGCTGAACGTTATAACTGGGCTGCAACAAGAGGGGTCAATGAAGAAATTCTCATGGAGAATTTGCCAGAAGACCTGCAGAGGGACATCAGACGTCATCTCTTTAAATTTGTTAAGAAAGTTCGAATTTTTGCCTTGATGGATGAGCCTATATTGGACGCCATCTGTGAGAGACTAAGACAAAAAATATACATCAAAGGAAGTGAAATTTTGTATGATGGTGGTCTGGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAATTGGAGAGCATTGGTGAAGATGGAATTAGAGTTCCTCTATCTGAAGGGAGTGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCCTCAGGTAACAAAGATGGTGGAAAAGCAAGGATTCCAAGACAAAGGTTGGTTAGCAATAGGACAGTGTTGTGCCTAACGAATGTGGAGGCATTTTCCCTAAGAGCAGCAGATCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTGAGGAGTCCTTGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGCCTTGCAGCAATGCGTATACAGAGTTATCAAGGAGACATGGCTAATTTTGAAAATGATGAGATGCCGATGCTGTCCAAAACAGATGCTCAACCATATGATGAACCTTTTGATTCTAAATTCCAAAGGCTTGTAACCAGGACACAAAGTGCATCAACAATTTCTGTTCCAATGAGTTCCTTGGAGTCATATGAGAGAGAAACTAGTCTTGCGGGTCATACTGGCCCACTTCTGAGTAAGAGAAAAACACCCTTTGTTCAGATGAGTGGTCCACTAAATGGTACACTGGGAACTGGAAAGGATTATAAATGTATCGTAATCAACTGGACTATGACAACAGCACTTGTTTTAATTAGAAGCATAAATGATCTTGTATATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCAGAGTCTACAGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTTATTACCTAAGGCATTATTTCCTTATTGACTTATTTGTTGTATTTCCTTTTCCTCAGAGGGTTAATCAATGCTTGCGAGATGCCTGCCACAAGTCTAATATTACTGGATGCATGAAGTTTATTGATTGTGGACATGACCTTAATGGAAACAATCAGCCTGACCTAAGATCAAGTCAATGGAACAACAATATAGATGCCATGAATTGTTTGAATCCCCCTTCTGAAGGTGGTTTTCCTTATGGGATCTATGATGCTGCTGTACCACTTACTACAGAAACAAACATGGCCAACAAATATGTGTACTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTATAGCTGGTAATCAAGAGCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGTCCATCATGGGATTGGGACTCTTGCTTTTTGCGATTCTAATTGGAAATATACAGAACTTTCTGCAGTCTCTTGGACGGAGGAAGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGCCGCTTACCAGAAGATCTAAGAAGGAGAGTAAGACAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTCATGGAGAATCTTCCAGAAGATCTACAGAGAGATATAAGACGTCATCTCTTCAAATTTGTTAAGAAAATTCGAATTTTTGCCCTGATGGATGAGCCTATCTTAGATGCCATATGTGAGAGACTAAGACAAAAGACATACATCAAAGGAAGTAGAATTTTGTGTCAGGGTGGTCTGGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAGAGCATTGGAGAAGATGGAACTAGAGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTGGAACATTCTTCTGTCAGCACAGATGGTAGAAAAGTAAGGCTTCCAGGACAGAGGTTGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAGGCATTTTCACTCTGTGCTGCAGACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCACGTGTTCAAGGAGCCTTAAGGTATGAATCACCATATTGGAGATCCCTTGCAGCAACCCGCATTCAAGTTGCATGGAGATACAGGAAGAAACGTCTAAATCGTGTTAATTCCTCACTATCAAAATGA 3651 0.4013 MAEFQKDEVPMLSDTHPKLSNEPADSKFQRLVPRTRSVSISIPMIPLEPYEINTNLVGHTGPLKSQRKTPFNQMSGPLYITHRPGNLFWQNMVAPGNKAVESKTEDFPSSCAMSENDLQNNYAGKNEHLVRSGQLGMCNDPYCTTCPTYFKATQQRDSKASGIFNPKFHNSLYGDAKGWARRLFAFLIPHVPRVMNPHTKLVQQWNKFFAICCLVAIFVDPLFFFLLSVQKEDKCIVINSTMKTVLVLLRSMNDFIYFLNIILQIIILFVLPKHLGSSGANYAKNILRAVVLVQYIPRLCRFIPMLISPTGFIFESAWESFFINLFIFMLSGHVVGSWCTKEYQIDANWNQWKNNANASACFTEDGFDYGIYLKAVNLTSDHHVVTRYVYSSFWGFQQISTLAGNLTPSYFVWEVLFTMAIIGMGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLADDLRRRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKIYIKGSEILYDGGLVEKMVFVVRGKLESIGEDGIRVPLSEGSVCGEELLTWCLEHPSGNKDGGKARIPRQRLVSNRTVLCLTNVEAFSLRAADLEEVTSLFARFLRSPCVQGAIRYESPYWRCLAAMRIQSYQGDMANFENDEMPMLSKTDAQPYDEPFDSKFQRLVTRTQSASTISVPMSSLESYERETSLAGHTGPLLSKRKTPFVQMSGPLNGTLGTGKDYKCIVINWTMTTALVLIRSINDLVYFFNILLQFRLAYVSPESTVVGAGDLVDHPKKIALYYLRHYFLIDLFVVFPFPQRVNQCLRDACHKSNITGCMKFIDCGHDLNGNNQPDLRSSQWNNNIDAMNCLNPPSEGGFPYGIYDAAVPLTTETNMANKYVYSLFWGFQQISTIAGNQEPSYFVWEVLFTMSIMGLGLLLFAILIGNIQNFLQSLGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRIFALMDEPILDAICERLRQKTYIKGSRILCQGGLVEKMVFVVRGKLESIGEDGTRVPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQGALRYESPYWRSLAATRIQVAWRYRKKRLNRVNSSLSK. 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04593 1216 SUPERFAMILY cAMP-binding domain-like 976 1165 IPR018490 -
Seca10g04593 1216 Gene3D - 182 443 - -
Seca10g04593 1216 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 138 272 - -
Seca10g04593 1216 CDD CAP_ED 1048 1164 IPR000595 -
Seca10g04593 1216 Gene3D Helix hairpin bin 976 1040 - -
Seca10g04593 1216 Gene3D Helix hairpin bin 446 510 - -
Seca10g04593 1216 Gene3D Jelly Rolls 516 640 IPR014710 -
Seca10g04593 1216 Gene3D Jelly Rolls 1046 1170 IPR014710 -
Seca10g04593 1216 SUPERFAMILY Voltage-gated potassium channels 197 447 - -
Seca10g04593 1216 CDD CAP_ED 518 634 IPR000595 -
Seca10g04593 1216 SUPERFAMILY Voltage-gated potassium channels 766 976 - -
Seca10g04593 1216 ProSiteProfiles cAMP/cGMP binding motif profile. 518 593 IPR000595 -
Seca10g04593 1216 MobiDBLite consensus disorder prediction 1 23 - -
Seca10g04593 1216 ProSiteProfiles cAMP/cGMP binding motif profile. 1048 1116 IPR000595 -
Seca10g04593 1216 SUPERFAMILY cAMP-binding domain-like 446 642 IPR018490 -
Seca10g04593 1216 SMART cnmp_10 518 653 IPR000595 -
Seca10g04593 1216 SMART cnmp_10 1048 1183 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04593 Seca-Chr10 104651011 104678451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04593 762 838 Ion Channels AT3G17700 64.935 1.57e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04593 K05391 - gmx:100795955 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04593 10 104651011 104678451 Seca10g04593 10 104651011 104678451 ECH