Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04591 ATGGCTCATTATGAAAAGGATGAGGTGCCAATGCTGTCAGAAACACATGTGGAACGATCTGATGAACTCTTCGACTCTAATTTCCGGAGGCTTGTATCCAGGACACGAAGTGCGTCGATTTCTATTCCCATGGCCTCCATGGAGCCATATGACAGAGAGGCTAATCTTGTAGGACATACTGGTCCACTTCGTAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTATATGCTACCCCTGCAACTGGAAATCTTTTGCAGCAGAGTATAGGTGTGAAAGGAAACAAAGTAGTGGACAGCAAGACAGAAAAGTTCTCTACTCTTGACATTAAAGATGAAAATCATTGGAATGACAACTATGATAGAAAAAATGAACACTTACTAAGATCTGGGCAACTGGGAATGTGTAATGATCCTTATTGCACTACTTGCCCTACTTACTTCAAGGCTTCTCAGCAAAGTAATTCAAAATCATCGACTACATTTGATTCAAAGTTCCAGAATTATCTTTACGGGGATGCCAAAGGTTTTGGGAGAAAACTTTTTTCCTTTTGCTCCTCACGTGTTCCTGGAGTTATGAATCCTCATGCTAAAGTTGTACAACAATGGAACCAGTTTTTGGCTATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAGGGAGGAGTATAAATGTATTGCTATCAACTGGACAATGACAAAAATACTTGTTTCACTTAGAAGCATCAATGATTTTGTATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCCCCTGAGTCAAGGGTGGTCGGTGCTGGAGATTTAGTTGACCATCCTAAGAAAATTGCTCTGAATTACCTGAAGGGTTATTTTCTTTTTGACTTATTTGTTGTAGTACCACTTCCTCAGATAATGATATTATTTGTCATACCAAATGCCTTGGGGTTATCAGGAGCAAATTATGCTAAGAATCTTCTGCGTGCAGCGGTACTTGTACAGTATTTCCCCAGATTATTTAGGTTTTTGCCTCTGCTAATTGGCCAGTCTCCAACTGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATAATAAACCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTTGCTGGTACCTCTTTGGACTACAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATCATTCTAAGCTATCTAGATGCATGGATTTGATTGATTGTGATCCCAAGTTGGAAAAGATACTAGACCAGTGGAAAAATAATACATATGCCACTGATTGTTTGAATTCCAAATCTGATGCTTTTCCTTATGGGATCTATGCCAATGCTGTACCACTTACTACAGAAACTAAGGTTGTCAACAAATATGTGTATGCACTGTTTTGGGGCTTCCAGCAAATCAGTACTCTGGCTGGCAATCAAACCCCAAGCTATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAGAAGGAAAGTACAACAGGCTGAACGATATAATTGGGCTGCAACAAGGGGGGTTGATGAAGAAATGCTTCTGGAGAAGTTGCCAGAAGATCTCCGGACAGAGATAAGACGTCATCTCTTCAAATTTGTCAAAAAGGTTCGGATTTTTGCCATGATGGATGAGCCTATTTTAGATGCCATTCGAGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAAGGTGGTCTCGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAATTGGAAAGCATTGGAGAAAATGGAATTGGAGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTAAGCAGAGATGGTAAAAAAGTAAGTCTTCCAGGGCAGGGGTTGCGGAGCAGCAGAACAGTAATATGCTTAACAAATGTGGAGGCATTTTCACTCCGTGCTGCAGACCTTGAACAAGTCACAATCCTTTTCACAAGATTCTTGCGGAACCCTCATGTTCAAGGAGCCCTAAGGTATGAATCACCTTATTGGAAATCCCTAGCAGCAACAAGGATTCAGAATCATCAAGGAAACATGGCTAATTTTGAAAAAGATGGGGTGCCAGTGCTGTCAGAAACACATGCAAAACTATCTGGTGAACTTCTGGATTCTAATTTCCGGAGGCCTGTATCAAGGACAAAAAGTGCATCAATTTCTATTCCCATGATCTCCATGGAGTCATATGAGAAAGAAACTAGTCTTAAAGGACATAGTGGTCCACTCTATAGTGAGAAAAAAAATCCCTCTATGCAGATAAGTAGTCCACTATATGCTACTCATGGAACTGAAAATCTTTTCCAGCATACTATAATTGTGACAGGAAACAAAGTAGCAGATTGCAAGACAGAAAAACTCCAAAATTCTCTTTATGGGGATGCCAAGTGTTTGGGGAGAAAACTTTTTTCTTTCTGCTCTTCATTTGTTCCTGGAGTAATGAACCCTCACACTAAAGTTGTACAGCAGTGGAACAAATTCTTAGCCATTTTCTGCTTGGTGGGAATTTTTGTGGATCCATTATTTTTTTTCTTAATCTATGTGCAGAAGGATTATAAATGTATTGTTATCAACTGGACAATGACAAAAACACTTGTTTTACTTAGAAGCATGAATGATTTTGTATATTTCTTGAACATTCTTCTCCAGTTCAGATTGGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATGACCCCAATAAAATTGCTGTCCATTACCTGCAGGGTTATTTTCTTCTCGACTATTTTGTTGTATTGCCTCTTCCTCAGATAATGGTATTGTCTGTCTTACCAAGACACTTGGGGTCATCAGGAGCAAATTATGCTAAGAATCTTCTGCATGCAGTGATCCTTGTGCAGTATATTCCTAGATTATTCCGGATTCTGCCTCTGCTAAATGGCCAGTCTACAATGGGATTCATATTTGAGTCATCCTGGGCAAATTTCATTATAAATCTTCTCATGTTTATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCCTTGGTCTTCAGAGGGTTAATCAATGCTTGAGGGATGCCTGCCGTAATTCTAATATTAATGAATGCATTGAAGTCATTGATTGTGGACATGGTAATATTGGAAACAACCAGTCCAGCCAAACATCAGCTATGTGGAACAACAATACAGATGCTATTGCTTGTTTGAATCCTGCTTCCAATGGTTTTCGTTATGGAATCTATGTCAATGCTGTACCACTTACTGTAGAAACTAATGTGGTCAACAAATATGTTTATTCTCTTTTTTGGGGATTCCAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCTGCTTAGAGGCCGTGATGTGGAGGAATGGATGAGGCATCGTCGCTTACCAGAAGATCTAAGAAAGAGAGTACGACAGGCTGAACAGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAATCGCTTCTTCAGAATTTACCAGAAGATCTCCAGATAGACATAAGGCGTCATCTCTTCAAATTTGTTAAGAAAATTCGAATCTTCTCCCTTATGGATGAGCCTATTTTAGACGCCATTTGTGAGAGACTGAGACAAAAGACATACATCAATGGAAGTAGAATTTTGAGTCAGGGTGGTCTAGTAGAGAAGATGGTCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGGATTTCAGTTCCCTTATCTGAAGGAGATGCTTGTGATGGTAAAAAAGTAAGGCTTCAGGGACAAAGGTTACTTAGCAATAGGACAGTAAAGTGCTTAACAAATGTGGAAGCTTTTTCACTCCGAGCTGCAGATCTTGAAGAAGTCACAACCCTTTTCATGAGATTCTTGAGGAGTCTACGTGTTCAAGGACCCCTAAGGTATGAATCACCATATTGGAGATCCCTTGCAGCAACCCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCAAAATCGTGCTGATTCCTCATTATCAGGTCAAACATTGAAGTCGTAG 4227 0.4036 MAHYEKDEVPMLSETHVERSDELFDSNFRRLVSRTRSASISIPMASMEPYDREANLVGHTGPLRSVRKTPFVQMSGPLYATPATGNLLQQSIGVKGNKVVDSKTEKFSTLDIKDENHWNDNYDRKNEHLLRSGQLGMCNDPYCTTCPTYFKASQQSNSKSSTTFDSKFQNYLYGDAKGFGRKLFSFCSSRVPGVMNPHAKVVQQWNQFLAIFCLVAIFVDPLFFFLIYVREEYKCIAINWTMTKILVSLRSINDFVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALNYLKGYFLFDLFVVVPLPQIMILFVIPNALGLSGANYAKNLLRAAVLVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHHSKLSRCMDLIDCDPKLEKILDQWKNNTYATDCLNSKSDAFPYGIYANAVPLTTETKVVNKYVYALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRKVQQAERYNWAATRGVDEEMLLEKLPEDLRTEIRRHLFKFVKKVRIFAMMDEPILDAIRERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKLESIGENGIGVPLSEGDACGEELLTWYLEHSSVSRDGKKVSLPGQGLRSSRTVICLTNVEAFSLRAADLEQVTILFTRFLRNPHVQGALRYESPYWKSLAATRIQNHQGNMANFEKDGVPVLSETHAKLSGELLDSNFRRPVSRTKSASISIPMISMESYEKETSLKGHSGPLYSEKKNPSMQISSPLYATHGTENLFQHTIIVTGNKVADCKTEKLQNSLYGDAKCLGRKLFSFCSSFVPGVMNPHTKVVQQWNKFLAIFCLVGIFVDPLFFFLIYVQKDYKCIVINWTMTKTLVLLRSMNDFVYFLNILLQFRLAYVSPESRVVGAGDLVDDPNKIAVHYLQGYFLLDYFVVLPLPQIMVLSVLPRHLGSSGANYAKNLLHAVILVQYIPRLFRILPLLNGQSTMGFIFESSWANFIINLLMFMLASHVVGSCWYLLGLQRVNQCLRDACRNSNINECIEVIDCGHGNIGNNQSSQTSAMWNNNTDAIACLNPASNGFRYGIYVNAVPLTVETNVVNKYVYSLFWGFQNFLQGLGRRRLEMLLRGRDVEEWMRHRRLPEDLRKRVRQAEQYNWAATRGVNEESLLQNLPEDLQIDIRRHLFKFVKKIRIFSLMDEPILDAICERLRQKTYINGSRILSQGGLVEKMVFIVRGKLESIGEDGISVPLSEGDACDGKKVRLQGQRLLSNRTVKCLTNVEAFSLRAADLEEVTTLFMRFLRSLRVQGPLRYESPYWRSLAATRIQVAWRYRKKRQNRADSSLSGQTLKS. 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04591 1408 ProSiteProfiles cAMP/cGMP binding motif profile. 1251 1312 IPR000595 -
Seca10g04591 1408 Gene3D Jelly Rolls 1249 1357 IPR014710 -
Seca10g04591 1408 Gene3D Jelly Rolls 594 718 IPR014710 -
Seca10g04591 1408 Gene3D Helix hairpin bin 1185 1243 - -
Seca10g04591 1408 Gene3D Helix hairpin bin 523 588 - -
Seca10g04591 1408 Gene3D - 204 521 - -
Seca10g04591 1408 Pfam Ion transport protein 894 1172 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Seca10g04591 1408 Pfam Ion transport protein 207 524 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Seca10g04591 1408 SUPERFAMILY Voltage-gated potassium channels 200 524 - -
Seca10g04591 1408 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 138 752 - -
Seca10g04591 1408 CDD CAP_ED 1251 1351 IPR000595 -
Seca10g04591 1408 SMART cnmp_10 596 731 IPR000595 -
Seca10g04591 1408 SMART cnmp_10 1251 1367 IPR000595 -
Seca10g04591 1408 SUPERFAMILY cAMP-binding domain-like 1181 1359 IPR018490 -
Seca10g04591 1408 SUPERFAMILY cAMP-binding domain-like 524 716 IPR018490 -
Seca10g04591 1408 ProSiteProfiles cAMP/cGMP binding motif profile. 596 664 IPR000595 -
Seca10g04591 1408 CDD CAP_ED 596 712 IPR000595 -
Seca10g04591 1408 SUPERFAMILY Voltage-gated potassium channels 886 1172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04591 Seca-Chr10 104566619 104587948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04591 2 674 Ion Channels AT3G17700 61.493 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04591 K05391 - ccaj:109789004 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04591 10 104566619 104587948 Seca10g04591 10 104566619 104587948 ECH