Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04580 ATGAATCAAGCACTAGTCGTCATCATTGTGGGTGGTAATGATTTTGTAAACAACTACTACTTGGTGCCTTATTCTGCAAGGTCCTACCAGTATCCTCTAACTAAATATGTCAAGTGTCTCATCTCTGAGTACCAAAAACTTTTGCAGAAGCTATATGATCTGGGAGCATGCAGAGTTCTTGTGATAGGCACGGGATCCCTGGGTTGTGTTCCTGCAAAATTGGCCCAACATGGAAGAAATGGACAATGTGCTACAAAACTACAACGAGCTGCAAAATTGTTTAACCCTCAAATTAAATTCATGTTACTACAACTCAACAGGAAAATTGGAAAGGACATTTTCATTGCTGCAAACATAGCATAA 363 0.3939 MNQALVVIIVGGNDFVNNYYLVPYSARSYQYPLTKYVKCLISEYQKLLQKLYDLGACRVLVIGTGSLGCVPAKLAQHGRNGQCATKLQRAAKLFNPQIKFMLLQLNRKIGKDIFIAANIA. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04580 120 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 2 118 - -
Seca10g04580 120 Pfam GDSL-like Lipase/Acylhydrolase 3 108 IPR001087 GO:0016788
Seca10g04580 120 Gene3D SGNH hydrolase 1 119 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04580 Seca-Chr10 104326692 104327169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04580 1 99 Pollen Coat Proteome AT1G75930 31.000 5.97e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04580 - - gmx:100812154 189.889