Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04562 ATGGCTGATGCTCATGAGACTGATAAGAACATTGAGGAGGCTGACCAGAGCAATTTTAGAGACCCTGTAAGCTCTGCTGATTATGAGGTGCAGGAAAAGATGCCTCTGTTGGAATGGTTTGCAAATGAATACAAGCGGTTTGGTTGCACTCTAGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGAGGGATCTTGCGTTACCAGCTTGATATGAGATCCTTTGATGCTTTTTCTGATGATGGAGAAGTATGCATTGCCCCAGAAGTGCTTCGTTCTGATGTGAGTTACTCTCTTGTTCTCACATATCTCAATCTCTGGGTGCCACGAATTTCAGCCATATTGCCGGCAACAGCTGGTGAAAATCTGCCATATCCTCTCTTACATTTTGTTCTATTGTTATAA 432 0.4282 MADAHETDKNIEEADQSNFRDPVSSADYEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDAFSDDGEVCIAPEVLRSDVSYSLVLTYLNLWVPRISAILPATAGENLPYPLLHFVLLL. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04562 143 Gene3D - 2 94 IPR029064 -
Seca10g04562 143 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 11 90 IPR004403 GO:0003747|GO:0006415
Seca10g04562 143 SUPERFAMILY L30e-like 12 81 IPR029064 -
Seca10g04562 143 Pfam eRF1 domain 3 19 79 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04562 Seca-Chr10 103973683 103974607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04562 12 93 Eukaryotic Initiation Factors Gene Family AT3G26618 81.707 2.75e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04562 K03265 - jre:109007891 159.073