Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04557 ATGGAGCCCTGTGAAGGTGGTGAGTTGTTTGATAAGATCATAAAGAAGGGGAATTTCAGTGAGAGACAAGTTTCCAAGTTGATCAAGAATATTGTTGAGGTTGTGGAAGCTTGTCATTCTCTTGGGATTATGCACAAAGACCTCAAACGGTCAAATCTAAGAACTTCTTATTCGACATTGTTGAAGAGGATGCTAAACTCAAAGCCACTGATTTCAGGTTGTCTATTTTTTACAAGCCAAATTTGGTTGTGTTCGAGTATATAA 264 0.3788 MEPCEGGELFDKIIKKGNFSERQVSKLIKNIVEVVEACHSLGIMHKDLKRSNLRTSYSTLLKRMLNSKPLISGCLFFTSQIWLCSSI. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04557 87 Gene3D Transferase(Phosphotransferase) domain 1 4 56 - -
Seca10g04557 87 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 55 - -
Seca10g04557 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04557 87 SUPERFAMILY Protein kinase-like (PK-like) 1 53 IPR011009 -
Seca10g04557 87 Pfam Protein kinase domain 1 53 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04557 Seca-Chr10 103881583 103881846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04557 1 53 EF-hand Containing Proteins AT1G35670 69.811 9.48e-22 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-Tthe Seca10g04557 Pkinase 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04557 K13412 - gmx:100805961 87.8113