Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04545 ATGGCTATGCAGGAGAAAAGGTTCAAAGATAACATGGATAGGTTGCAAAAATGGAAGAATGCTTTGCAACAAGTTGCTAACTTAGTTGGCTCTCATTTCATACTTAGGAATGAATATGAACATGAATTTATCTGGAAGATAGTTAAAGAGGTTTCCGATAAGATTAATCGCCAACCTTTACATGTTGCAAGTTACCCCGTTGGACTAGAACCTCGAGTACAACAAGTTCTCTCGCTTCTAGATCTTGCATCCGATAATGTGGTGCACATGGTAGGGATCTATGGAATTGGTGGAATGGGTAAAACAACACTTGCTCGTGCAGTTTATAATTATGTTGCTGACATATTTGAAGGTCTTTGTTTTCTTAATGATATGAGAAAACATGGATTAGTAGATCTCCAAAAGACACTTCTTTCTGATATAGTTGGAGAGAAGGATATTCAGATAGGGAGTTTTAGTGAAGGGATTCCAATAATCGAGCGTAGGCTCAAGGGAAAGAAGATTCTTTTAATTCTTGATGATGTTGACAATATGAAACAGTTATGGGCAATTGCTGGAAAGCTTACTTGGTTTGGTTCCGGTAGCAGAGTCATCATAACAACCCGAGACAAACATTTGCTAACAACTCATGGGATTAAAAAAACTTATGAGGTAGATGGATTGAACGAGAAAGAAGCGTGTGAGTTGCTTAGTTGGAATGCTTTTAAAAATGATGAAGTTGATCCAAGTTATAAGAATGTTATAAACCAAGTAGTAGCTTATGCTTCTGGCCTCCCACTGGCTTTAGAAGTAATAGGTTGCAACTTATTTGGAAGAGATACTAAAAAATGGGAATCTGCATTACATTCATATGAAAAGATTCCTATTAAAGAGATTCAAGAAGTACTTAAAGTGAGCTTTGATGCTTTGGAGGAGGAAGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGTTTAAGAGGATATAGATTGGCAGAGGTCAAAGAAATACTTCATGCTAATCATGGTAGTGACATGGAATATCAAATTGAAGTGTTGATTGACAAATCTCTCATAAAGATTACTCACTTGGATGAGGTGACACTACATGACCTGATTGAGGATATGGGTAAAAAAATTGTCCTTCAAAAATCACCAAAAGAGCCAGGAAAACGCACTAGGTTATGGGATCATAAAGATATAGTTAAAGTTTTAAAAGAAAATATGGGAACAAATGAAATTGAAATCATATATCTGAATGGCTCCTTATTTAATGAAGAAAAAGAGGAAGAAGATGAAGTAGAGTGGGATGGAGAAGCTTTCAAGAATATGACAAACCTCAAAACGTTGATAATTAAAAACATCCGTTTTTCCAAAGGTCCTAAACATTTTCCAAAAAGCTTAAGAGTACTCGAATGGTGGGGATATCCTTCACACCATTTACCTCTAAATAGACTTTCCATATGCAAGTTACCTTATAGTCATTGTACCTGTATGTTTGGAAGCGCGTTGCAGAATCACCTTAAAAAGTTGGTGAATATGAAAGTTTTAAAATTGGACTTCTGTAGATATTTAAATGAGATATGTGACGTGTCTGGTCTCCCAAATTTAAAAGAACTTTCATTTGAAGAATGTAAGAATCTAATTACAATTCATGATTCGGTAGGGTACTTGGAGAAACTTGAAATTTTGAATGCCGGAGGCTGCTACGAGCTTAGGAGTTTTCCACCCTTCAAGTTGCCCTCTCTTAAAGAATTTGATTTTGATTTTTGTTTAAGTCTTAAGAGTTTTCCAGAAATAATAGGAAAGATGGAAAAGATAACTAAGCTTAGTTTTAGGCACATTAATATTAAAGAACTGCCGCTTTCATTTCGAAATCTTACTCGGCTTCAAAAATTAGATATGTCAAATTGCACTGTGATGATGCCAGAACTAGCCGAGCCTATGGTCTATCAAGCGGGGAAAAAGTGGCTATTCCCTAAACAGGATGAGGGTGAAGAAAAAGTGAGCTCATTGTCGTCATCAAAGGTAGAACGTCTTACACTCCGAGAATGCAATATGTCAAATGAATTTTTGGCAATAGGTCTCACATGGTTTGTTAACCTGAAAGAATTAAACCTATGGTATAATCATAATTTCACAATTGTTCCTGAATGCATCAAAGAATGTCGCTTTTTATGGAAGCTTGTTTTGGATGAATGCGACCAACTTCAAGAGATTAAAGGGATTCCGCCCAACTTAAAATATTTCTCTGCACACGGTTGCAATTCCTTGACTTCTGAGTGTAGAAGCAAATTCCTGAAGCAGGAACTGCATGAGCCTGGAAACACAAACTTTATTTTGCCAGGAAGAGCAAACATTCCAGAGTGGTTTGAGCACCAGAGTAGGGGACAATCAACTTCTTTCTGGTTTCGTAACATGTTTCCTGACATAGTGCTCTCTCTTGTTTATCCTATTCCACAGATATATTTTTGTTCACGTGTAGTCGTGATCATCAATGACAAATTTTTCTATAAGGAAAAGGGATATGCGACTAGAATGTTTCTATCGACGTTTGCAGGTCATACACATCTTCTTCATTTGCTAAGGGAAAATTTCATTCATAATATGGACAAAGCATTTTTAGAAAATTTCAATGATAATTCGGATGAAGCACTTTTAGAAAATCAATGGAACCATGCGAAGGTTGCAATAGAGGATGACAAAGATGGATTCGGATACGGAGTGAAATATGAAGTCATAATGGAAGCGCTAAATAACATAGATATTGGAATCCATATATTGAAAGAGAAAAGTGTCATGGAGGATATTCGATTCACCAATCCTTATGAAAAGCCACAATTTCCTGAGAACGATGTTGATGATCTTTCTGTCTCAATCTCTAAAATGCAACTCTGA 2874 0.3629 MAMQEKRFKDNMDRLQKWKNALQQVANLVGSHFILRNEYEHEFIWKIVKEVSDKINRQPLHVASYPVGLEPRVQQVLSLLDLASDNVVHMVGIYGIGGMGKTTLARAVYNYVADIFEGLCFLNDMRKHGLVDLQKTLLSDIVGEKDIQIGSFSEGIPIIERRLKGKKILLILDDVDNMKQLWAIAGKLTWFGSGSRVIITTRDKHLLTTHGIKKTYEVDGLNEKEACELLSWNAFKNDEVDPSYKNVINQVVAYASGLPLALEVIGCNLFGRDTKKWESALHSYEKIPIKEIQEVLKVSFDALEEEEQSVFLDIACCLRGYRLAEVKEILHANHGSDMEYQIEVLIDKSLIKITHLDEVTLHDLIEDMGKKIVLQKSPKEPGKRTRLWDHKDIVKVLKENMGTNEIEIIYLNGSLFNEEKEEEDEVEWDGEAFKNMTNLKTLIIKNIRFSKGPKHFPKSLRVLEWWGYPSHHLPLNRLSICKLPYSHCTCMFGSALQNHLKKLVNMKVLKLDFCRYLNEICDVSGLPNLKELSFEECKNLITIHDSVGYLEKLEILNAGGCYELRSFPPFKLPSLKEFDFDFCLSLKSFPEIIGKMEKITKLSFRHINIKELPLSFRNLTRLQKLDMSNCTVMMPELAEPMVYQAGKKWLFPKQDEGEEKVSSLSSSKVERLTLRECNMSNEFLAIGLTWFVNLKELNLWYNHNFTIVPECIKECRFLWKLVLDECDQLQEIKGIPPNLKYFSAHGCNSLTSECRSKFLKQELHEPGNTNFILPGRANIPEWFEHQSRGQSTSFWFRNMFPDIVLSLVYPIPQIYFCSRVVVIINDKFFYKEKGYATRMFLSTFAGHTHLLHLLRENFIHNMDKAFLENFNDNSDEALLENQWNHAKVAIEDDKDGFGYGVKYEVIMEALNNIDIGIHILKEKSVMEDIRFTNPYEKPQFPENDVDDLSVSISKMQL. 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04545 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 314 IPR027417 -
Seca10g04545 957 Gene3D - 54 214 IPR027417 -
Seca10g04545 957 PRINTS Disease resistance protein signature 90 105 - -
Seca10g04545 957 PRINTS Disease resistance protein signature 162 176 - -
Seca10g04545 957 PRINTS Disease resistance protein signature 617 633 - -
Seca10g04545 957 PRINTS Disease resistance protein signature 255 269 - -
Seca10g04545 957 Pfam NB-ARC domain 72 296 IPR002182 GO:0043531
Seca10g04545 957 SUPERFAMILY L domain-like 428 756 - -
Seca10g04545 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 633 IPR044974 GO:0006952
Seca10g04545 957 Gene3D - 220 304 IPR042197 -
Seca10g04545 957 Gene3D - 1 53 IPR035897 -
Seca10g04545 957 Gene3D Ribonuclease Inhibitor 596 763 IPR032675 -
Seca10g04545 957 Gene3D Ribonuclease Inhibitor 397 595 IPR032675 -
Seca10g04545 957 SUPERFAMILY "Winged helix" DNA-binding domain 290 398 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04545 Seca-Chr10 103748245 103752048 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04545 88 764 WRKY Transcription Factor Family AT5G45050 28.632 3.41e-59 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04545 - - gmx:100814962 949.503