Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04539 ATGGCTCTATCACAACCATCCTCCTCTTCCTTTGCCAATGATTTCACCTACGATGTGTTCCTCAGCTTTAGAGGCTCTGATACTCGCCTCCATTTCACTGGCAATCTTTGGAAAGCCCTTTGTGACAAGGGAATCTGCACATTCTTTGATGATAAGGAGCTTCGAAAAGGGGAAGAAATAACACCAGCACTTGAGAAGGCAATTGAAAATTCCAGGATTGCCATCATTGTTCTATCTGAGGACTATGCATCTTCTTCATTTTGCTTGGATGAGCTTTCCAAGATCCTTGACTGCATTAAGGGAAAGGGCCGGTTAGTTTGGCCGGTCTTTTATAAGGTGGATCCTTCTGATGTGCGAAAGCAAACAGGGACTTACGGAGAAGCAATGGCTATGCAGGAGAAAAGGTTCAAAGATAACATGGATAGGTTGCAAAAATGGAAGAATGCTTTGCAACAAGTTGCTAACTTAGTTGGCTCTCATTTCATACTTAGGAATGAATATGAACATGAATTTATTTGGAAGATAGTTAAGGAGGTTTCCGACAAGATTAATCGCCAACCTTTACATGTTGCAAGTTACCCCGTTGGACTAGAACCTCGAGTACAACAAGTTCTCTCGCTTCTAGATCTTGCATCCGATAATGTGGTGCACATGGTAGGGATCTATGGAATTGGTGGAATGGGTAAAACAACACTTGCTCGTGCAGTTTATAATTATGTTGCTGACATATTTGAAGGTCTTTGTTTTCTTAATGATATGAGAAAACATGGATTAGTAGATCTCCAAAAGACACTTCTTTCTGATATAGTTGGAGAGAAGGATATTCAGATAGGGAGTTTTAGTGAAGGGATTCCAATAATCGAGCGTAGGCTCAAGGGAAAGAAGATTCTTTTAATTCTTGATGATGTTGACAATATGAAACAGTTATGGGCAATTGCTGGAAAGCTTACTTGGTTTGGTTCCGGTAGCAGAGTCATCATAACAACCCGAGACAAACATTTGCTAACAACTCATGGGATTAAAAAAACTTATGAGGTAGATGGATTGAACGAGAAAGAAGCGTGTGAGTTGCTTAGTTGGAATGCTTTTAAAAATGATGAAGTTGATCCAAGTTATAAGAATGTTATAAACCAAGTAGTAGCTTATGCTTCTGGCCTCCCACTGGCTTTAGAAGTAATAGGTTGCAACTTATTTGGAAGAGATACTAAAAAATGGGAATCTGCATTACATTCATATGAAAAGATTCCTATTAAAGAGATTCAAGAAGTACTTAAAGTGAGCTTTGATGCTTTGGAGGAGGAAGAGCAAAGTGTTTTTCTTGACATTGCTTGTTGTTTAAAAGGATATAGACTGGCAGAGGTCAAAGAAATACTTCATGCTAATCATGGTAGTGGCATGGAATATCAAATTGAAGTGTTGATTGACAAATCTCTCATAAAGATTATTGACTGGGATAAGGTGACACTACATGACCTGATTGAGGATATGGGTAAAAAAATTGCTAGTCAAAAATCACCCAAAGAGCCAGGAAAACGCACTAGGTTATGGGATCATAAAGATATAGTTAAAGTTTTAAAAGAAAATAAGGGAACAAATGAAATTGAAATCATATATCTGAATGGCTCCTTACTTAATGAAGAAAAAGAGGAAGAAGATGAAGTAGATTGGGATGGAGAAGCTTTCAAGAATATGACAAACCTCAAAACGCTGATAATTAAAAACATCCGTTTTTCTAAAGGTCCTAAACATTTTCCAAAAAGCTTAAGAGTACTCGAATGGTGGGGATATCCTTCACACCATTTACCTCCAAATAGACTTTCCATATGCAAGTTACCTTATAGTCATTGTACCTGTATGTTTGGAAGCGCGTTGCAGAATCACCTTAAAGTGGGTTGGATGCAAAAGATACAGTGGATAACATTCATTTTGATGTGCATCCATATGTTTAAGTTGGTGAATATGACAGTTTTAAATTTGGACGACTGTGAATATTTAACAGAGATATGTGACGTGTCTAGTCTCCCAAATTTAAAAAAACTTTCATTTCAAGAATGTAAGAATCTTATTACAATTCACGATTCGGTTGGGTACTTGGAGAAACTTGAAATTTTGAAAGCTAGTGGCTGCCACAAGCTTAGGAGTTTTCCACCCTTCAACTTGCCCTCTCTTAAAGATTTTGATTTTATTTATTGTGAAAGTCTTAAGAGTTTTCCAAAAATAACAGGAAAGATGGAAAAGATAACTAAGCTTAGGTTTCAGGGCATTAACATGAAAGAACTACCGCATTTATTTCGAAATCTTACTCGGCTTCAAAATCTTCAAGATCTTGAAATGATATATTGCAAAATGTTTCAGTCAGGAAAGAGTGAGCTATTCCCTAAACAGGACGGGGGTGAACAAAAAGTGAGCTCAATGTCGTTATCAAAGGTGGAACATCTTACACTCCGAGGATGCAATATGTCAAATGAATTTTTGGCAATAGGTCTCACATGGTTTGTTAACCTGAAAGAATTAATCCTACGGTATGATCATAATTTCACAATTGTTCCTGAATGCATCAAAGAGTGCCGCTTTTTATGGAAGTTTCATTTATCTGAATGCGACCAACTTCAAGAAATTAAAGGGATTCCCCCCAGCTTAAAATATTTCTCTGCACATGGTTGCAATTCCTTGACTTCTGAGTGTAGAAGCATGTTCCTGAAGCAGGAACTGCATGAGCTTGGAAACACCAGCTTTGTTTTGCCGGGAAGAGCAAGCATTCCGGAGTGGTTCGAGCACCAAAGCAGGGGACAATCAACTTCTTTCTGGTTTCGTAACAAGTTTCCACGGATATATTTACATTCACGTTTAGCCGTGATCATCAACGACAAGAAATTTTCCTATATGGATTTGGATTGTGCCGATTATATTTTTCTATCGGCGATTGCAGGTCATACACATCTTCTTCATTTGCTAAGGGAAAATTTCATTCATAATCTGGATGAAGCACTTTTAGAAAATCAGTGGAACCATGCGAAGATTACAATAGAGAGTCACGAAGTTATATTTGGATATGGAGTGGAATATGGAGTCATATTGGAAATGCTAAATAGCATAGATATTGGAATCCATGTATTGAAAGAGAAAAGTGTCATGGAGGATATTCAATTCACCAATCCTTATGAAAAGCCACAATTTCCTGAGAATGATGTTGATGATCTTACTATCTCACTCTCTAAAATTCAATTCTGA 3231 0.3745 MALSQPSSSSFANDFTYDVFLSFRGSDTRLHFTGNLWKALCDKGICTFFDDKELRKGEEITPALEKAIENSRIAIIVLSEDYASSSFCLDELSKILDCIKGKGRLVWPVFYKVDPSDVRKQTGTYGEAMAMQEKRFKDNMDRLQKWKNALQQVANLVGSHFILRNEYEHEFIWKIVKEVSDKINRQPLHVASYPVGLEPRVQQVLSLLDLASDNVVHMVGIYGIGGMGKTTLARAVYNYVADIFEGLCFLNDMRKHGLVDLQKTLLSDIVGEKDIQIGSFSEGIPIIERRLKGKKILLILDDVDNMKQLWAIAGKLTWFGSGSRVIITTRDKHLLTTHGIKKTYEVDGLNEKEACELLSWNAFKNDEVDPSYKNVINQVVAYASGLPLALEVIGCNLFGRDTKKWESALHSYEKIPIKEIQEVLKVSFDALEEEEQSVFLDIACCLKGYRLAEVKEILHANHGSGMEYQIEVLIDKSLIKIIDWDKVTLHDLIEDMGKKIASQKSPKEPGKRTRLWDHKDIVKVLKENKGTNEIEIIYLNGSLLNEEKEEEDEVDWDGEAFKNMTNLKTLIIKNIRFSKGPKHFPKSLRVLEWWGYPSHHLPPNRLSICKLPYSHCTCMFGSALQNHLKVGWMQKIQWITFILMCIHMFKLVNMTVLNLDDCEYLTEICDVSSLPNLKKLSFQECKNLITIHDSVGYLEKLEILKASGCHKLRSFPPFNLPSLKDFDFIYCESLKSFPKITGKMEKITKLRFQGINMKELPHLFRNLTRLQNLQDLEMIYCKMFQSGKSELFPKQDGGEQKVSSMSLSKVEHLTLRGCNMSNEFLAIGLTWFVNLKELILRYDHNFTIVPECIKECRFLWKFHLSECDQLQEIKGIPPSLKYFSAHGCNSLTSECRSMFLKQELHELGNTSFVLPGRASIPEWFEHQSRGQSTSFWFRNKFPRIYLHSRLAVIINDKKFSYMDLDCADYIFLSAIAGHTHLLHLLRENFIHNLDEALLENQWNHAKITIESHEVIFGYGVEYGVILEMLNSIDIGIHVLKEKSVMEDIQFTNPYEKPQFPENDVDDLTISLSKIQF. 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04539 1076 Gene3D Ribonuclease Inhibitor 744 924 IPR032675 -
Seca10g04539 1076 Gene3D Ribonuclease Inhibitor 532 743 IPR032675 -
Seca10g04539 1076 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Seca10g04539 1076 PRINTS Disease resistance protein signature 218 233 - -
Seca10g04539 1076 PRINTS Disease resistance protein signature 383 397 - -
Seca10g04539 1076 PRINTS Disease resistance protein signature 290 304 - -
Seca10g04539 1076 PRINTS Disease resistance protein signature 672 688 - -
Seca10g04539 1076 SUPERFAMILY "Winged helix" DNA-binding domain 418 526 IPR036390 -
Seca10g04539 1076 SUPERFAMILY L domain-like 555 910 - -
Seca10g04539 1076 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Seca10g04539 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Seca10g04539 1076 Pfam TIR domain 17 184 IPR000157 GO:0007165
Seca10g04539 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 442 IPR027417 -
Seca10g04539 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 740 IPR044974 GO:0006952
Seca10g04539 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Seca10g04539 1076 SMART till_3 16 156 IPR000157 GO:0007165
Seca10g04539 1076 Gene3D - 348 432 IPR042197 -
Seca10g04539 1076 Gene3D - 182 342 IPR027417 -
Seca10g04539 1076 Gene3D - 16 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04539 Seca-Chr10 103664646 103672464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04539 11 777 WRKY Transcription Factor Family AT4G12020 27.960 1.05e-62 232