Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g04534 | ATGGCTCTACGATCATCCTTGTCTTCCTTCACCTATGGATTTAGCTATGATGTGTTCCTTAGTTTCAGAGGGACAGACACTCGCTTCGGTTTTACTGGTTATCTCTACAAATCACCGTGTGACAGTGGAATCAAAACCTTCATTGATGATGATGAGCTTCGGAGAGGGGAGGAAATCACACCAGCACTTGTCAAGGCCATTGAAGAATCCAGAATTGCCATCCCTGTGTTCTCTACCAACTATGCTTCTTCTTCCTTTTGCTTAGATGAATTTGTCAACATTATTGAGCGAGTCAAGGCAAAGGGTCGGTTGGTTTTGCCAGTTTTCTATGACGTGGATCCCTCTCATGTAAGACATCAAAAAGGGACTTATGATGAAGCGTTGACTAAGCATGAGGAGAAGTTCAAGGACAACATGGAGAAGGTGCAAAACTGGAGGAAGGCTCTACATCAAGCAGCTAACTTGTCGGTTGGCACTTTAAGCGGTAGGGATGGATATGAACATGAGTTTATTGGGAAGATCGTTAAAGAGGTCTCAAGAAAGATTAAACGTGCTGCTTTACATGTTGCTGATTATCCAGTTGGATTAGAGTCTCAAGTGCTAAAGGTAAATTCACTTTTGGATGTTGGGTCTGATGATAGAGTTCACATGGTAGGGATCCATGGGATGGGTGGAATAGGTAAGACAACACTTGCTCTAGCGGTTTATAATTTGGTTGCCGACCATTTTGAAGGATTATGTTTTCTTGAAAAAGTTAGAGAAAATTCAGAGAAATATGGGTTACTATATCTCCAAAAGATTTTTCTTTCTGAAATACTTGGAGAGATAAATATTGAATTAACAAGTGTCAAACAAGGAATTTCAATAATACAACATAGGTTGCAAAGAAAGAAGGTTCTTTTGATCTTAGATGATGTTAACAAAAAGGAGCAATTGCAGACTATTGTTGAAAGACCTGATTGGTCTGGTCTCGGTAGCAGAGTCATCATCACGACTCGGGATGAACAATTGCTAGCATGTCACGAGATTGAAAAAACATATGGGGTGGAAGAATTGAGTGAAAAAGATGCTCTTGAGTTGCTCAAATGGAAAACTTTTAAGACCAAGAAAATTGATCCAAGTTATCTAGACATTTTAAAACGTACAGTGACTTATGCTTCCGGCCTTCCATTGGCATTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAACTTCAACAGAATGGGAGCTTGCACAGTATGAAAGGATTCCTAATAAAGAGATCCAAAAGATACTTGAAGGATATGGATTTATAGAGGTCAAAGATATACTTTGTGCTCATTATGGTCACCACATGGAATATCACATTGGAGCGTTGGTTGAAAAATCTCTCATAAAGATCTGGATTGATACAGTGACACTCCATGACTTGATAGAGGACATGGTAAAGAAATTGTTCGAAAAGAATCACCGAAAGAGGTTGGAAAACGCAACAGGGTGGTTATCTAAAGATATATTCCAAGTTTTAAAAAATAATAAGGAGTTCATGAATATGAGAGTTTTAAATTTTGACAACTGTGACTGTTTAACTCGGATAAGTGATGTATCTGGTCTCCCAAATTTAGAAAAAATTTCTTTTCAAAATTATAAGAATTTAATTACAATTCATGATTCAGTTGGGTTGTTGGATAAATTGGAAACCTTGAATGCGTTTGGCTGCATCAAGCTTAAGAAATTTCCACCCCTCCATTTGATCTCTCTTGAAAAACTTGATCTTTCATATTGTCCTAGTCTAGAAACTTTTCCAGAAATATTAGTAGACATGAAATATATGACAGAGCTTAAGTTGTATGAAACTCACGTGAAAGAATTGCCATTATCATTTCAAAATCTTAATTGGCTTGAAAAGTTATATCTGTCTACTAATGGAACTATTCAATTACCAATAAGTAGCATTGTCATGATGCCAGAGCTGACTGAGATTAGAGTCACAACATCAAGGGGTGGGTTGAAATTGAAAAAACAGGAAGAGGGTGAAGACAAATTGAGCTCAATGCTACCTTCAAAAGTAGAATATTTGGGCCTCTTTAATTGCTACTTGTCAGATGAATTTTGGTCAATAGGTGTCACGTGGTTCACTAATGTGAAAGAATTAGACCTATCGGATAATCAATTCACAATTATTCCTGAATGCATTAAAGAATGTCCCTATTTATGGAAGCTTTGGTTGGACAATTGTGAACAACTTCGAGAAATTAGAGGGATTCCTCCGAGCTTGAAAGATTTCTCTGCATGCAATTGCAAATCCTTAAGTTACTCAAGTAGAAGCATGTTACTCAAACAGGTTAGGTTTTGA | 2334 | 0.3732 | MALRSSLSSFTYGFSYDVFLSFRGTDTRFGFTGYLYKSPCDSGIKTFIDDDELRRGEEITPALVKAIEESRIAIPVFSTNYASSSFCLDEFVNIIERVKAKGRLVLPVFYDVDPSHVRHQKGTYDEALTKHEEKFKDNMEKVQNWRKALHQAANLSVGTLSGRDGYEHEFIGKIVKEVSRKIKRAALHVADYPVGLESQVLKVNSLLDVGSDDRVHMVGIHGMGGIGKTTLALAVYNLVADHFEGLCFLEKVRENSEKYGLLYLQKIFLSEILGEINIELTSVKQGISIIQHRLQRKKVLLILDDVNKKEQLQTIVERPDWSGLGSRVIITTRDEQLLACHEIEKTYGVEELSEKDALELLKWKTFKTKKIDPSYLDILKRTVTYASGLPLALEVIGSNLFGKTSTEWELAQYERIPNKEIQKILEGYGFIEVKDILCAHYGHHMEYHIGALVEKSLIKIWIDTVTLHDLIEDMVKKLFEKNHRKRLENATGWLSKDIFQVLKNNKEFMNMRVLNFDNCDCLTRISDVSGLPNLEKISFQNYKNLITIHDSVGLLDKLETLNAFGCIKLKKFPPLHLISLEKLDLSYCPSLETFPEILVDMKYMTELKLYETHVKELPLSFQNLNWLEKLYLSTNGTIQLPISSIVMMPELTEIRVTTSRGGLKLKKQEEGEDKLSSMLPSKVEYLGLFNCYLSDEFWSIGVTWFTNVKELDLSDNQFTIIPECIKECPYLWKLWLDNCEQLREIRGIPPSLKDFSACNCKSLSYSSRSMLLKQVRF. | 778 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g04534 | 777 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Seca10g04534 | 777 | PRINTS | Disease resistance protein signature | 293 | 307 | - | - | |
Seca10g04534 | 777 | PRINTS | Disease resistance protein signature | 575 | 591 | - | - | |
Seca10g04534 | 777 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Seca10g04534 | 777 | SMART | till_3 | 15 | 155 | IPR000157 | GO:0007165 | |
Seca10g04534 | 777 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 188 | 418 | IPR027417 | - | |
Seca10g04534 | 777 | Pfam | TIR domain | 16 | 183 | IPR000157 | GO:0007165 | |
Seca10g04534 | 777 | SUPERFAMILY | "Winged helix" DNA-binding domain | 427 | 503 | IPR036390 | - | |
Seca10g04534 | 777 | ProSiteProfiles | TIR domain profile. | 14 | 182 | IPR000157 | GO:0007165 | |
Seca10g04534 | 777 | SUPERFAMILY | L domain-like | 499 | 765 | - | - | |
Seca10g04534 | 777 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 8 | 155 | IPR035897 | - | |
Seca10g04534 | 777 | Gene3D | - | 12 | 180 | IPR035897 | - | |
Seca10g04534 | 777 | Gene3D | - | 351 | 430 | IPR042197 | - | |
Seca10g04534 | 777 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 16 | 752 | IPR044974 | GO:0006952 | |
Seca10g04534 | 777 | Gene3D | Ribonuclease Inhibitor | 594 | 774 | IPR032675 | - | |
Seca10g04534 | 777 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 13 | 184 | - | - | |
Seca10g04534 | 777 | Gene3D | - | 181 | 346 | IPR027417 | - | |
Seca10g04534 | 777 | Pfam | NB-ARC domain | 199 | 422 | IPR002182 | GO:0043531 | |
Seca10g04534 | 777 | Gene3D | Ribonuclease Inhibitor | 492 | 593 | IPR032675 | - | |
Seca10g04534 | 777 | Pfam | Leucine Rich Repeat | 707 | 728 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g04534 | Seca-Chr10 | 103579027 | 103582912 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g04534 | 194 | 510 | WRKY Transcription Factor Family | AT5G45050 | 28.363 | 4.91e-31 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g04534 | - | - | vra:106764825 | 832.402 |