Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04532 ATGTATCTTGTTTCATTTAAATATTGCGGAAATCTAGTTACAATTCACAATTCAGTTGGGTTGCTGCATAAACTTAAAGTCTTGGATGCTGAAGGTTGCAGCAAGATTAAGAAATTTCCACCCCTCCAATTGCCGTCTCTTGAACAACTGAAAATTTCATATTGCTCAAGGCTTGAGAGTTTTCCAGAAATATTAGTAAAGATGGAAAATATGACAGAGCTTGACTTGACTGAAACTCCCATAAAAGAATTCCCATCTTCGTTTCGGAATCTTAGTGGGCTTCAAAGGTTAAAGCTGAACGATGAAGAAAGTGTTCAGTTTGCAAAAAGTAGCATTCTCATGATGCCACAGTTGACTGAGATTTATACCAGTTTAGTTGAAGTAAGTCAAGTAACTATAAGAAAGGACGAAGAAGTTCTGTATCTCGAGGGCATCCGTTCAAATGAGTTTTTGGCATTCTGTCTCACATGGTGTGCTAACCTGAAAGAATTGAAGTTATACAAAAGTGATATCACAGTTGTTCCTGAATGCATCAAAGAATGCCGCTTTTTATGGAAACTTACATTGGATGATTGCAAACAACTTGAAGAAATCAGAGGGATTCCACCCAGCCTACAGGAGATTTGTTTGATTGGATGTGAAAAACTTGAAGAAATCAGAGGGATTCCATTTCCACACAGCCTAGAATATTTAGATGCACTAGGATGCTTCTCTTTGAGTTTGTCATGTAGAAGCATGTTACTGAATCAGAAAATGCATGAGGCTGGAAACACATTCTTTATTTTGCCAAGCCCCTCAACAAGAGGGATACCAGAGTGGTTCGAGCACCAGAGCAGGGGACCACCGATTTATTTCTGGTTTCGTAACAAATTCCCTCACATAGCCCTCTGTGTTTGTGCATATGAAGATTGTATAGACACCCTGTACATCAACGGCAAGCAATTTGACTATAAAGTTTACTACGAAATTGACTCTACTGATGACGACAATGACTCTACAGATGACAAGAATGACTATACGGATGACGATATTGTGTCTACAGATGACGACGAGGCGGGTCAATATCATACAGATATTATTCATATTGGAGCGAAAAATTTAGTGGGTAAAGAGTGTACTCTGGATGAAGCACTTTTGAAAAATAAGTGGAATGAAGTGGAGGTTATCCTTCACTCCATGTACTTCAAATTCCAAAAGCCAATCAGTTTTGGAATTCATGTATTGAATGGGAGAAGCAGCAATATTCGATTCACCAATCCTTACAAAAAGAGGAAATCAGACTTAAACTTGCCACCACTTGCAGAGAATGATGTTAATACTGAGCTTACTCTGTCATTTGCAAAAAGTGAAGATGAGATCATGATTTTGTATGAAACCAAGCTTTTACATACCAGTCAAACCACGTGGAAGACAAACCAGCTTTGCATTCTTGTTTGCTCTCGACACCATCCATCCATAGACCAAATACTATCCTTTCTTCTCATGGCTCTGTTACCACCACCCTCCTCTTCATCCTTCACCTATGATGTGTTCCTCAGCTTCAGAGGCACGGATACTCGCCACAATTTCATAGGCTTTCTCTACAAAGCTCTTTGTGACAAGGGATTCCGCATCTTCATTGATGATGAGGAGCTTCCAAGAGGAGATGAAATCACCCCATCACTTGTCAAGGCCATCAAAGAGTCCATGATTGCCATCCCTGTATTCTCTGAGAACTATGCTTCTTCTTCATTCTGTTTAGATGAACTTGTCAACATCATTGAGCAAGTCAAAGGGACAGATCGGTTGATTTTGCCGGTTTTCTATAAGGTGGATCCTTCTCACGTGCGTCATCAAACTGGGAGTTATGGAGAGGCACTTGCCAAGCATGAGAAAAGCCTCACAAATGATATGGAGAGGTTGCAGAAATGGAAGATGGCTCTTCATGAAGCATCTAACCTGTCCGGCATGCATTTCAAACCCGAGGATGGATATGAATACAATTTTATTGAAAAGATCGTGGAAGAGATCTCCAACAAGATTAGTCGTCGCACTCCATTACTACATGTTGCAAATCACCCTGTTGGGCTAGAGTCTCGAATGCAAAAAGTAATGTCCCTTATGGATGTTGAATCTGATGATAAAGTTCTCATGGTAGGGATCTATGGAATTGGCGGAATAGGTAAAACAACTCTTGCTCGAGCAATTTATAATTCCATTGCTAACTCATTTGAAGGTTCATGTTTTCTTCATAATGTGAGAGAAAGTTCAAATAAACATGGCTTAAAAGATCTCCAAGAGAAGCTTCTTTCAAAAACAGTTGGCTTCAATGAGGAGCTAGGACATTTCAGTGAAGGGATTTCAATAATAAAAGAAAAGCTACTAAAAAAGAAGGTTTTTTTAATTCTTGATGATGTTGACGACAAGGAGCAATTGGAGGTTATGGTTGGAGAACCTAGTTGGTTTGGTTCAGGCAGCAGGATCTTCGTTACCACTCGAGACAAACAATTGCTAGCAAATCATGGGGTTGAGATAACGTATGAAATGGATGAGTTAAATGAGGAGGAAGCTCTTGAATTGTTTAAGTGGAATGCATTTAAAAACAATGACAAAGTTGATCCAAGTTATGAGAACATTCTAAAGCAAGCAGTAGCTTATGCTTCAAGCCTTCCGTTGGCTTTGGAAGTTATAGGTTCCCTTTTGTGTGGGAAAAACATTCAGGAATGGGGATCTGCAATTGATAGGTTTAAAAAAAACCCGAGCAAAAAAATCCTAGACAAACTTAAAATAAGCTATGATGGTTTAGAAGAAATTCAACAGAAAATTTTCCTCGACATTTCTTGTTGCCTCAAAGGATATAATCTAGATGATATTGAATTAATACTTTCTGCTCACTATGGAGTTTGCGTGGAATATGATATTGGAGTGCTAGCTGATAAATCTCTCATAAAAATTGGTTTGGATCGTTGGGACTGGAAGGATGGTGTGACAATGCATGACTTGATAGAGGAAATGGGAAAAGAAATTGTTCGACAAGAATCACCGAAAGAGCTTGGAAAACGCAGTAGGTTATGGTTTCATGAAGATATAATTCAAGTTTTAGAAGAAAATATGGGAACAAGTGAAACTGAAATGATATATCTAGATTTTTGGTTGGGTGAAGAAGTAAAACATGAAGTAGAATGGGATGGCGAGGCTTTCAAGAAGATGAAAAACCTCAAAACACTTTATATATGGAATATGGAGTTTTGCAAAGGTCCAGAGTATCTTCCAAACAGCTTAAGAGTGTTGGAATGGTTTGGATATCCTTCTCCGAGTTTGCCATTTGATTTTCATCCGAAGAATCTTTCTATATGCATATTATGTGGAGGATGCCTCACATCATTTGAGATGCATGGGTCATTAAAAATGAGAAAGTTCATGAATATGAGAGTTTTAATGCTTGACGGCTGTGGATGTTTAACAAGAATAGCCGATGTATCTTGTTTCCCAAATTTAGAAATGTTTTCATTTGAAGATTGTGAGAATCTGGTTACAATACACAATTCAGTTGGGTTGCTGCATAAACTTAAAGTCTTGAATGCTCAAGGTTGCAGCAAGATTAAGAAATTTCCACCCCTCCAGTTGCCGTCTCTTGAAAAACTCGATCTTTCAAATTGCTCAAGCCTTGAGAGTTTTCCAGAAATATTAGTAAAGATGGAAAATATGAGAGAGCTTGACTTGGAAGGAACTCCCATAAAAGAATTCCCATCTTCATTTGGGAATCTTAGTGGGCTTCAAAGGTTAAGGTTGAACGATGAAGAAACTTTTCAGTTTGCAAAAAGTAGCATTCTTATGATGTCACAGTTGGCTGAGATTCATGTCCGTTTACCTATTTTTGCAACTATAAAAAAGGACGGAAGAAGACTAAACTTTATGTCCCGCAGCATTACAAATGAGTTTTTGACATTCAGTCTCACATGGTGTGCTAATGTGGAAGAATTATACTTATACAAAAGTGATCTCACAGTTGTTCCTGAATGCATCAAAGAATGCCGCTTTTTACGGAAGCTTGTTTTGGGTGGTTGCAAACAACTTGAAGAAATCAGAGGGATTCCACCCAGCCTACAGAAGATTTATTTGAATGGATGTGAAAAACTTGAAGAAATCAGAGGGATTCCATTTCCACACAGCCTGCAATATTTATGTGCAACAGGATGCGTATCTTTGAGTATGTCATGTAGAAGCATGTTACTGAATCAGGAACTGCATAAGGCTGGAAACACACGCTTTATTTTGCCAAGCCCAACAAGAGGAATACCAGAGTGGTTCGAGCACCAGAGCATAATATATGACCAGGGCCTACTATATGATGAAACGCCAATTTGTTTCTGGTTTCGTAACAACTTCCCTCACATAGCTCTCTGTCTTTTTTCATTTGGGGAGTATCCATTTGTAGGTTATATACAGATCGTGTACATCAACTGCGAGCTATTTGACTATGTAGATTACGACGAACTTGACTCTACGGATGACTACAGTGACATTGACACTATAGGTGACGGCAATGACCCTACAGATAACCACAGTATGCATTATACACAAATTATTCATATTAGAGCGAAAAATTTAGTGGGTGATGATTGTATTCTGGATGAAGCATTGTCAAAAAATGAATGGAACCATGTGAAGGTTATCATAGGAGCATACAATGAGCAAATCAGAATTGGAATTCATGTATTGAAAGAGAGAAGAAGCAACAATATTCGATTCACCAATCCTTACGAAAAGACAATGGGTGGAAAAATGCTGGTCTCGGCTTCTTGA 4785 0.3854 MYLVSFKYCGNLVTIHNSVGLLHKLKVLDAEGCSKIKKFPPLQLPSLEQLKISYCSRLESFPEILVKMENMTELDLTETPIKEFPSSFRNLSGLQRLKLNDEESVQFAKSSILMMPQLTEIYTSLVEVSQVTIRKDEEVLYLEGIRSNEFLAFCLTWCANLKELKLYKSDITVVPECIKECRFLWKLTLDDCKQLEEIRGIPPSLQEICLIGCEKLEEIRGIPFPHSLEYLDALGCFSLSLSCRSMLLNQKMHEAGNTFFILPSPSTRGIPEWFEHQSRGPPIYFWFRNKFPHIALCVCAYEDCIDTLYINGKQFDYKVYYEIDSTDDDNDSTDDKNDYTDDDIVSTDDDEAGQYHTDIIHIGAKNLVGKECTLDEALLKNKWNEVEVILHSMYFKFQKPISFGIHVLNGRSSNIRFTNPYKKRKSDLNLPPLAENDVNTELTLSFAKSEDEIMILYETKLLHTSQTTWKTNQLCILVCSRHHPSIDQILSFLLMALLPPPSSSSFTYDVFLSFRGTDTRHNFIGFLYKALCDKGFRIFIDDEELPRGDEITPSLVKAIKESMIAIPVFSENYASSSFCLDELVNIIEQVKGTDRLILPVFYKVDPSHVRHQTGSYGEALAKHEKSLTNDMERLQKWKMALHEASNLSGMHFKPEDGYEYNFIEKIVEEISNKISRRTPLLHVANHPVGLESRMQKVMSLMDVESDDKVLMVGIYGIGGIGKTTLARAIYNSIANSFEGSCFLHNVRESSNKHGLKDLQEKLLSKTVGFNEELGHFSEGISIIKEKLLKKKVFLILDDVDDKEQLEVMVGEPSWFGSGSRIFVTTRDKQLLANHGVEITYEMDELNEEEALELFKWNAFKNNDKVDPSYENILKQAVAYASSLPLALEVIGSLLCGKNIQEWGSAIDRFKKNPSKKILDKLKISYDGLEEIQQKIFLDISCCLKGYNLDDIELILSAHYGVCVEYDIGVLADKSLIKIGLDRWDWKDGVTMHDLIEEMGKEIVRQESPKELGKRSRLWFHEDIIQVLEENMGTSETEMIYLDFWLGEEVKHEVEWDGEAFKKMKNLKTLYIWNMEFCKGPEYLPNSLRVLEWFGYPSPSLPFDFHPKNLSICILCGGCLTSFEMHGSLKMRKFMNMRVLMLDGCGCLTRIADVSCFPNLEMFSFEDCENLVTIHNSVGLLHKLKVLNAQGCSKIKKFPPLQLPSLEKLDLSNCSSLESFPEILVKMENMRELDLEGTPIKEFPSSFGNLSGLQRLRLNDEETFQFAKSSILMMSQLAEIHVRLPIFATIKKDGRRLNFMSRSITNEFLTFSLTWCANVEELYLYKSDLTVVPECIKECRFLRKLVLGGCKQLEEIRGIPPSLQKIYLNGCEKLEEIRGIPFPHSLQYLCATGCVSLSMSCRSMLLNQELHKAGNTRFILPSPTRGIPEWFEHQSIIYDQGLLYDETPICFWFRNNFPHIALCLFSFGEYPFVGYIQIVYINCELFDYVDYDELDSTDDYSDIDTIGDGNDPTDNHSMHYTQIIHIRAKNLVGDDCILDEALSKNEWNHVKVIIGAYNEQIRIGIHVLKERRSNNIRFTNPYEKTMGGKMLVSAS. 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04532 1594 Gene3D - 844 929 IPR042197 -
Seca10g04532 1594 Pfam NB-ARC domain 692 924 IPR002182 GO:0043531
Seca10g04532 1594 SUPERFAMILY Toll/Interleukin receptor TIR domain 499 649 IPR035897 -
Seca10g04532 1594 Gene3D Ribonuclease Inhibitor 3 134 IPR032675 -
Seca10g04532 1594 Gene3D - 676 838 IPR027417 -
Seca10g04532 1594 MobiDBLite consensus disorder prediction 327 348 - -
Seca10g04532 1594 Gene3D Ribonuclease Inhibitor 135 254 IPR032675 -
Seca10g04532 1594 SUPERFAMILY L domain-like 1005 1404 - -
Seca10g04532 1594 Gene3D Ribonuclease Inhibitor 1219 1411 IPR032675 -
Seca10g04532 1594 Gene3D Ribonuclease Inhibitor 1118 1218 IPR032675 -
Seca10g04532 1594 SUPERFAMILY L domain-like 9 243 - -
Seca10g04532 1594 ProSiteProfiles TIR domain profile. 506 674 IPR000157 GO:0007165
Seca10g04532 1594 Pfam TIR domain 508 675 IPR000157 GO:0007165
Seca10g04532 1594 Gene3D - 502 675 IPR035897 -
Seca10g04532 1594 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 508 1365 IPR044974 GO:0006952
Seca10g04532 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 673 939 IPR027417 -
Seca10g04532 1594 PRINTS Disease resistance protein signature 711 726 - -
Seca10g04532 1594 PRINTS Disease resistance protein signature 880 894 - -
Seca10g04532 1594 PRINTS Disease resistance protein signature 786 800 - -
Seca10g04532 1594 PRINTS Disease resistance protein signature 1200 1216 - -
Seca10g04532 1594 MobiDBLite consensus disorder prediction 327 349 - -
Seca10g04532 1594 FunFam Disease resistance protein (TIR-NBS-LRR class) 504 676 - -
Seca10g04532 1594 SMART till_3 507 647 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04532 Seca-Chr10 103479689 103487174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04532 24 194 WRKY Transcription Factor Family AT4G12020 31.395 5.81e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04532 - - gmx:100814962 1035.02