Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04505 ATGGAGTGCAATAAGGATGAGGCCATCAGAGCTAAAGAAATTGCTGAGAAAAAGTTTGTTGCAAAGGATACTTTGGGAGCAAGAAAGTTTGCTTTGAAGGCCCAGAGTTTATTTCCTAGTCTTGATGGTATTTCTCAATTGTTAACAGTAATTAATGTGTATAATTCTGCGACTAATGAAATAAATGGTGAAATGGTTCATATGCTTCACCCTAATAATAACAAGTCCATTGGTGCAGATTGGGCCTTTAAACTAGTTTCAGAGGCATGGAACATACTATCAGATAAGGCTAAAAGGGTAACATATGATGAGAAGATAAATGCAATGACTCAGGGGAAAACTGTTGAAGAGATTAGCGAGAAACCAAGTCAAATTCAGACAGATTCTAATGACAAAACAACAGTGAAAGAGATCATTGGAAATACCTACCAAAAAGAAAATGGGGAAGGAGGAAAATCTGTAAGAAACTCAGATGGAAGAATGAATGGATCCGAAGCCATGAATTTATTTGCAGACGCTATCACATATTTTGACATGGAGGACATGTTATCAATAGAAGCTCCAGATCCTCATTTCTATGATTTTGACATGGATCGAATTGAAGGATCTTTTTATGAAAATCAAGTATGGGCTTTATTTGATGAACAAGAAGGGATGCCTCGATATTATGCAATAATACACAATGTCATTTCTATGAATCCATTCAAGATGCAGTTCACCTGGCTCGACATGAAGAAGACTGAGGTTGAAAGGACCCCAACTCTGAATTAG 771 0.3684 MECNKDEAIRAKEIAEKKFVAKDTLGARKFALKAQSLFPSLDGISQLLTVINVYNSATNEINGEMVHMLHPNNNKSIGADWAFKLVSEAWNILSDKAKRVTYDEKINAMTQGKTVEEISEKPSQIQTDSNDKTTVKEIIGNTYQKENGEGGKSVRNSDGRMNGSEAMNLFADAITYFDMEDMLSIEAPDPHFYDFDMDRIEGSFYENQVWALFDEQEGMPRYYAIIHNVISMNPFKMQFTWLDMKKTEVERTPTLN. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04505 256 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Seca10g04505 256 Gene3D DnaJ domain 55 168 IPR036869 -
Seca10g04505 256 PANTHER BNAC03G44070D PROTEIN 1 63 - -
Seca10g04505 256 Pfam Domain of unknown function (DUF3444) 184 250 IPR024593 -
Seca10g04505 256 SUPERFAMILY Chaperone J-domain 64 108 IPR036869 -
Seca10g04505 256 Pfam DnaJ domain 66 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04505 Seca-Chr10 102842548 102843396 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04505 4 109 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.412 8.17e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04505 - - tpra:123911521 152.91