Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04500 ATGGAGTGCAATAAGGATGAGGCCATTAGAGCTAAAGAAATTGCTGAGAAGAAGTTTGTTGCAAAGGATACTTTGGGAGCAAGAAAGTTTGCTTTGAAGGCCCAAAGTTTATTTCCTAGTCTTGATGGTATTTCTCAATTGTTAACAGTAATTAATGTGTATAATTCTGCTACTAATGAAATAAATGGTGAAGTAGTCCTAAATTGGTATGGTATACTTGGTGTGGATCCCCTGGTTGATGATGACACATTGAGGAAACAGTATCAAAAGATGGTTCATATGCTTCACCCTAATAATAACAAGTCCATTGGTGCAGATTGGGCCTTTAAATTAGTTTCAGAGGCATGGAACATACTATCAGATAAGGCTAAAAGGGTAACATATGATGAGAAGATAAATGCAATGACTCAGGGGAAAACTGTTGAAGAGATTAGCAAGAAACCAAGTCAAATTCAGACAGATTCTAATGACAAAACAACAGTGAAAGAGATCTTTGGAACCTACCAAAAAGAAAATGAGGAAGGAGGAAAATCTGTAAGAAACTCAGATGGAAGAATGAATGGATCCGAAGCCATGAATTTATTTGCAGACACTATCACATATTTTGACATGGAGGACATGTTATCAATCGAAGCTCCAGATCCTCATTTCTATAATTTTGACATGGATCGAATTGAAGGATCTTTTTGTGAAAATCAAGTATGGGCTTTATTTGATGAACAAGAAGGGATGCCTCGATATTATGCAATAATACACAATGTCATTTCTATGAATCCATTCAAGATGAAGTTCACCTGGCTCGACATGAAGAAGACTGAGGTTGAAAGGACCCCAACTCTGAATTGGGGTGTGTCACGCTTTTCAAGAGCTTGTGGGAATTTCATAATGGGAAGACATGAGATCACTAACACATTCAATTTTTTCTCTCACAAAGTGAGATATAAAAAAGGTAATGATGGAACTATTTTTATATATCCCAACAAAGGGGATGTTTGGGCACTCTATAGAAATTGGTCTTCAAAATGGAATAGATTAACACCTGATGAGGTGACACAAAAGTATGATATTGTTGAAGTACTTGATGTTTTCAATGATTTCATTGTCATTCCTCTGGTCAAAGTGGCTGGTTTCAGGACAATATTTCGTCGTGAGTTGGATTTGAGAGAAATCAGGGTCATTCCAAGGAAAGAAATATTGCGGTTCTCTCATCAGGTTCCTTCAACCATACTTACTGGTGAAGAAGCTCCAGATTCCTCAAAGGGTTGCTGGGAGTTGGACCCAGCAGCTATTTCATCTGAACATCTTGAGGTAATCGAAGTTGTGAAGGAAAAAGACATTGTTATGGTCAACAATGAGGATACTATGATTAAAGAAACAACAGATGATAGCATGAAAGAAGCTGATAGTGAGGAAATGAACAATGATATAGGAACACATGTGGAAGAAAAGAAGGAGATATTGAAACTTTAG 1470 0.3701 MECNKDEAIRAKEIAEKKFVAKDTLGARKFALKAQSLFPSLDGISQLLTVINVYNSATNEINGEVVLNWYGILGVDPLVDDDTLRKQYQKMVHMLHPNNNKSIGADWAFKLVSEAWNILSDKAKRVTYDEKINAMTQGKTVEEISKKPSQIQTDSNDKTTVKEIFGTYQKENEEGGKSVRNSDGRMNGSEAMNLFADTITYFDMEDMLSIEAPDPHFYNFDMDRIEGSFCENQVWALFDEQEGMPRYYAIIHNVISMNPFKMKFTWLDMKKTEVERTPTLNWGVSRFSRACGNFIMGRHEITNTFNFFSHKVRYKKGNDGTIFIYPNKGDVWALYRNWSSKWNRLTPDEVTQKYDIVEVLDVFNDFIVIPLVKVAGFRTIFRRELDLREIRVIPRKEILRFSHQVPSTILTGEEAPDSSKGCWELDPAAISSEHLEVIEVVKEKDIVMVNNEDTMIKETTDDSMKEADSEEMNNDIGTHVEEKKEILKL. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04500 489 Pfam Domain of unknown function (DUF3444) 209 414 IPR024593 -
Seca10g04500 489 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca10g04500 489 PRINTS DnaJ domain signature 70 88 IPR001623 -
Seca10g04500 489 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca10g04500 489 SUPERFAMILY Chaperone J-domain 65 134 IPR036869 -
Seca10g04500 489 SMART dnaj_3 67 124 IPR001623 -
Seca10g04500 489 CDD DnaJ 68 121 IPR001623 -
Seca10g04500 489 MobiDBLite consensus disorder prediction 460 480 - -
Seca10g04500 489 Pfam DnaJ domain 68 129 IPR001623 -
Seca10g04500 489 Gene3D DnaJ domain 67 181 IPR036869 -
Seca10g04500 489 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Seca10g04500 489 PANTHER BNAC03G44070D PROTEIN 1 430 - -
Seca10g04500 489 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04500 Seca-Chr10 102618527 102619996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04500 4 133 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.313 1.38e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04500 - - gmx:102661977 332.413