Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04492 ATGGAGTGCAATAAGGATGAGGCCACCAGATCTAAAGAAATTGTTGAGAAGAATTTTGCTGCAAAAGATATTTTGGGAGCAAGGAAGTTTGCTTTGAAGGCGCAAAGTTTATTTCCTAGTCTTAAGGGTATTTCTCAAATTTTAACAACACATAAAGTGTATATTTATGATACTAATGAAATAAATGGGAAAGTAATCCTAGATTGGTATGGTATACTTGGTGTGGATCCCTTGGTTGACAATGACACAGTGAGGAAACAATATAGAAAGCTGGTTCATATGCTTCACCCTGATAATAAAAAGTCCATTGGTGTAGATTGGGCTTTAAAACTAGTTTCGGAGGCATGGAATATACTATCAAATAAGGCTATAAGGTTAGCATATGATAAGATGATCGAGGCAAGGACAGATGGTGAAGAGATTAGCAAGAAAGCAAGTCAAATTAAGAAAGATTCTACTGACAAAACAGCAGTAAAATAG 480 0.3542 MECNKDEATRSKEIVEKNFAAKDILGARKFALKAQSLFPSLKGISQILTTHKVYIYDTNEINGKVILDWYGILGVDPLVDNDTVRKQYRKLVHMLHPDNKKSIGVDWALKLVSEAWNILSNKAIRLAYDKMIEARTDGEEISKKASQIKKDSTDKTAVK. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04492 159 PANTHER BNAC03G44070D PROTEIN 1 130 - -
Seca10g04492 159 SMART dnaj_3 67 124 IPR001623 -
Seca10g04492 159 SUPERFAMILY Chaperone J-domain 67 132 IPR036869 -
Seca10g04492 159 MobiDBLite consensus disorder prediction 138 159 - -
Seca10g04492 159 Gene3D DnaJ domain 67 158 IPR036869 -
Seca10g04492 159 CDD DnaJ 68 121 IPR001623 -
Seca10g04492 159 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca10g04492 159 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca10g04492 159 PRINTS DnaJ domain signature 70 88 IPR001623 -
Seca10g04492 159 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Seca10g04492 159 Pfam DnaJ domain 68 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04492 Seca-Chr10 102319050 102319529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04492 4 129 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.154 1.45e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04492 - - cave:132178886 179.489